Cow genome map


           Conread name:
           Tra1-TCH01C100049
        

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 250
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 277
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 127
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               294
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               48, 368
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 264
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 280
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 375
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               201, 69
               

               Conread position:
               7-393
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               13-391
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 21
               

               Conread position:
               13-394
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 27
               

               Conread position:
               13-398
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 19
               

               Conread position:
               20-391
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 321
               

               Conread position:
               20-394
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 261
               

               Conread position:
               35-230
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               121, 12
               

               Conread position:
               47-391
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 222
               

               Conread position:
               47-394
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 87
               

               Conread position:
               47-398
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 122
               

               Conread position:
               51-388
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               85, 226
               

               Conread position:
               68-396
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               102-394
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               159-394
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               191-394
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               5, 105
               

               Conread position:
               199-394
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               142, 11
               

               Conread position:
               630-859
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               630-863
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               630-863
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               631-863
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               631-863
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               24, 64
               

               Conread position:
               631-863
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               639-863
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 212
               

               Conread position:
               640-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               109, 51
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               641-863
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               17, 132
               

               Conread position:
               645-859
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               646-863
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               646-863
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               646-863
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               648-851
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               73, 125
               

               Conread position:
               648-859
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               654-863
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               60, 108
               

               Conread position:
               688-859
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               701-863
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               740-859
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.