Cow genome map

Conread name: Tra1-TCH01C100080

Conread position: 1-143
Cow position: chr1:82942363-82942225 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 1-143
Cow position: chr1:82944195-82944333 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 1-158
Cow position: chr1:59518997-59518842 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 98, 33

Conread position: 1-159
Cow position: chr1:82936515-82936669 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1-160
Cow position: chr1:72011731-72011887 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 1-165
Cow position: chr1:6941550-6941380 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 122

Conread position: 1-165
Cow position: chr1:6958963-6958793 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 122

Conread position: 1-165
Cow position: chr1:24534175-24534337 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 102, 43

Conread position: 1-165
Cow position: chr1:41697137-41696975 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 43

Conread position: 1-165
Cow position: chr1:49317414-49317579 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 70

Conread position: 1-165
Cow position: chr1:55088973-55089136 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 101, 50

Conread position: 1-165
Cow position: chr1:89741913-89742079 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 72

Conread position: 1-166
Cow position: chr1:92963477-92963311 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 64

Conread position: 1-174
Cow position: chr1:7971494-7971323 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 108, 0

Conread position: 1-185
Cow position: chr1:22730816-22730641 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 166, 65

Conread position: 2-151
Cow position: chr1:74832502-74832357 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 2-165
Cow position: chr1:55135917-55135749 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 74

Conread position: 2-165
Cow position: chr1:90864212-90864376 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 91, 62

Conread position: 3-110
Cow position: chr1:54157376-54157268 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 3-118
Cow position: chr1:95974480-95974366 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 3-140
Cow position: chr1:30504581-30504443 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 65

Conread position: 3-143
Cow position: chr1:88359958-88359819 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 65

Conread position: 3-145
Cow position: chr1:8624369-8624513 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 64

Conread position: 3-148
Cow position: chr1:5023682-5023830 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 99, 66

Conread position: 3-149
Cow position: chr1:96599212-96599348 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 3-150
Cow position: chr1:19515539-19515683 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 64

Conread position: 3-153
Cow position: chr1:92684614-92684763 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 100, 107

Conread position: 3-156
Cow position: chr1:5539196-5539352 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 72

Conread position: 3-156
Cow position: chr1:30983417-30983565 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 31

Conread position: 3-156
Cow position: chr1:75142077-75141926 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 96, 64

Conread position: 3-158
Cow position: chr1:8695-8540 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 68

Conread position: 3-158
Cow position: chr1:51394498-51394339 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 99, 65

Conread position: 3-158
Cow position: chr1:56225865-56225711 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 126, 64

Conread position: 3-158
Cow position: chr1:68672522-68672676 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 31

Conread position: 3-158
Cow position: chr1:81580257-81580093 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 34

Conread position: 3-158
Cow position: chr1:91811857-91811705 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 50

Conread position: 3-158
Cow position: chr1:93554916-93554762 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 60

Conread position: 3-158
Cow position: chr1:98576127-98575969 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 90, 64

Conread position: 3-158
Cow position: chr1:98594645-98594496 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 55

Conread position: 3-161
Cow position: chr1:68676439-68676282 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 65

Conread position: 3-161
Cow position: chr1:97696824-97696663 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 41

Conread position: 3-162
Cow position: chr1:37726340-37726500 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 64

Conread position: 3-162
Cow position: chr1:98512007-98511848 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 63

Conread position: 3-163
Cow position: chr1:6304784-6304944 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 63

Conread position: 3-163
Cow position: chr1:39224846-39225008 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 68

Conread position: 3-163
Cow position: chr1:42545699-42545867 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 65

Conread position: 3-163
Cow position: chr1:45288791-45288953 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 134
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 99, 65

Conread position: 3-163
Cow position: chr1:50930899-50931057 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 41

Conread position: 3-163
Cow position: chr1:98551800-98551635 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 70

Conread position: 3-164
Cow position: chr1:3923720-3923877 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 3-164
Cow position: chr1:8128888-8129053 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 106, 70

Conread position: 3-164
Cow position: chr1:22525958-22525793 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 68

Conread position: 3-164
Cow position: chr1:65028614-65028449 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 100, 68

Conread position: 3-164
Cow position: chr1:82880724-82880562 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 46

Conread position: 3-164
Cow position: chr1:88913399-88913236 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 86, 25

Conread position: 3-164
Cow position: chr1:89076553-89076711 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 64

Conread position: 3-164
Cow position: chr1:89350045-89349880 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 70

Conread position: 3-165
Cow position: chr1:4032712-4032545 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position: chr1:4291244-4291077 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 41

Conread position: 3-165
Cow position: chr1:4374257-4374422 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 60

Conread position: 3-165
Cow position: chr1:6972606-6972446 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 3-165
Cow position: chr1:8347203-8347040 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 96, 64

Conread position: 3-165
Cow position: chr1:8349245-8349398 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 108, 44

Conread position: 3-165
Cow position: chr1:10778643-10778483 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 35

Conread position: 3-165
Cow position: chr1:11729255-11729098 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 3-165
Cow position: chr1:14308952-14309118 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 65

Conread position: 3-165
Cow position: chr1:16961930-16962092 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 96, 64

Conread position: 3-165
Cow position: chr1:20000668-20000834 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 68

Conread position: 3-165
Cow position: chr1:20950794-20950638 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 3-165
Cow position: chr1:21787416-21787247 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 66

Conread position: 3-165
Cow position: chr1:25734947-25734785 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 33

Conread position: 3-165
Cow position: chr1:26615994-26616158 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 3-165
Cow position: chr1:26702127-26702290 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 29

Conread position: 3-165
Cow position: chr1:28177084-28176926 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 34

Conread position: 3-165
Cow position: chr1:30417968-30418121 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 63

Conread position: 3-165
Cow position: chr1:31934587-31934429 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 3-165
Cow position: chr1:33206800-33206954 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 66

Conread position: 3-165
Cow position: chr1:34159916-34159754 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 18, 66

Conread position: 3-165
Cow position: chr1:34686260-34686107 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 105, 51

Conread position: 3-165
Cow position: chr1:34856548-34856714 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 69

Conread position: 3-165
Cow position: chr1:36932234-36932074 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 3-165
Cow position: chr1:39068876-39069038 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 100, 68

Conread position: 3-165
Cow position: chr1:41181925-41181762 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position: chr1:43311692-43311859 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 96, 66

Conread position: 3-165
Cow position: chr1:43352576-43352741 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 55

Conread position: 3-165
Cow position: chr1:43703489-43703324 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position: chr1:43822479-43822317 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 37

Conread position: 3-165
Cow position: chr1:44507053-44506885 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 96, 64

Conread position: 3-165
Cow position: chr1:45223661-45223496 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 65

Conread position: 3-165
Cow position: chr1:46030281-46030439 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 3-165
Cow position: chr1:47886400-47886569 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 57

Conread position: 3-165
Cow position: chr1:48444114-48444277 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 106, 64

Conread position: 3-165
Cow position: chr1:50992013-50991851 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 68

Conread position: 3-165
Cow position: chr1:51417851-51417689 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position: chr1:53425257-53425092 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 45, 66

Conread position: 3-165
Cow position: chr1:53520991-53520828 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position: chr1:53623036-53622877 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 48

Conread position: 3-165
Cow position: chr1:54156655-54156815 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 34

Conread position: 3-165
Cow position: chr1:54258646-54258481 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 96, 12

Conread position: 3-165
Cow position: chr1:55819131-55818978 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 107, 41

Conread position: 3-165
Cow position: chr1:56477672-56477504 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 68

Conread position: 3-165
Cow position: chr1:61542839-61543001 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 100, 40

Conread position: 3-165
Cow position: chr1:61846224-61846062 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 109, 65

Conread position: 3-165
Cow position: chr1:63390687-63390854 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 65

Conread position: 3-165
Cow position: chr1:64302163-64302331 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 32

Conread position: 3-165
Cow position: chr1:64804022-64804185 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 64

Conread position: 3-165
Cow position: chr1:68618851-68619016 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 69

Conread position: 3-165
Cow position: chr1:68951705-68951544 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 28

Conread position: 3-165
Cow position: chr1:70026265-70026427 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 53

Conread position: 3-165
Cow position: chr1:71119601-71119433 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 69

Conread position: 3-165
Cow position: chr1:72068755-72068922 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 64

Conread position: 3-165
Cow position: chr1:72105486-72105328 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 96, 56

Conread position: 3-165
Cow position: chr1:72684772-72684613 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 15

Conread position: 3-165
Cow position: chr1:72813696-72813531 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 65

Conread position: 3-165
Cow position: chr1:74955941-74956104 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 31

Conread position: 3-165
Cow position: chr1:78092117-78091952 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 65

Conread position: 3-165
Cow position: chr1:78697692-78697853 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 79

Conread position: 3-165
Cow position: chr1:81355623-81355792 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 70

Conread position: 3-165
Cow position: chr1:81868649-81868809 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 62

Conread position: 3-165
Cow position: chr1:85647700-85647865 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 68

Conread position: 3-165
Cow position: chr1:87936978-87936816 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 68

Conread position: 3-165
Cow position: chr1:89485660-89485493 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 71

Conread position: 3-165
Cow position: chr1:89785989-89785828 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 41

Conread position: 3-165
Cow position: chr1:90976008-90976168 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-165
Cow position: chr1:91066072-91066236 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 25

Conread position: 3-165
Cow position: chr1:93810509-93810346 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 102, 62

Conread position: 3-165
Cow position: chr1:94226475-94226635 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 60

Conread position: 3-165
Cow position: chr1:95215110-95215264 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 3-165
Cow position: chr1:99609448-99609285 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 36

Conread position: 3-165
Cow position: chr1:100474314-100474148 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 66

Conread position: 3-165
Cow position: chr1:100706206-100706050 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 3-166
Cow position: chr1:724820-724653 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 70

Conread position: 3-166
Cow position: chr1:35162490-35162325 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 68

Conread position: 3-166
Cow position: chr1:39418031-39418205 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 65

Conread position: 3-166
Cow position: chr1:39426925-39427086 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-166
Cow position: chr1:41115639-41115799 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 76, 26

Conread position: 3-166
Cow position: chr1:48769882-48769719 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 68

Conread position: 3-166
Cow position: chr1:57297562-57297392 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 68

Conread position: 3-166
Cow position: chr1:69539771-69539613 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-166
Cow position: chr1:74927964-74927798 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 65

Conread position: 3-166
Cow position: chr1:78809956-78809796 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 3-167
Cow position: chr1:42868860-42869024 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 31

Conread position: 3-167
Cow position: chr1:45555446-45555279 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 68

Conread position: 3-167
Cow position: chr1:61391709-61391874 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 31

Conread position: 3-167
Cow position: chr1:94261616-94261457 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 64

Conread position: 3-168
Cow position: chr1:6394637-6394472 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 62

Conread position: 3-179
Cow position: chr1:1759946-1760131 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 3-183
Cow position: chr1:78067989-78068164 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 4-148
Cow position: chr1:16855620-16855763 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 67

Conread position: 4-158
Cow position: chr1:10942015-10942174 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 91, 64

Conread position: 4-158
Cow position: chr1:10964371-10964212 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 91, 64

Conread position: 4-158
Cow position: chr1:26729792-26729640 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 95, 18

Conread position: 4-159
Cow position: chr1:1956255-1956411 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 107, 33

Conread position: 4-162
Cow position: chr1:61560644-61560807 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 65

Conread position: 4-162
Cow position: chr1:69264887-69264731 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 59

Conread position: 4-162
Cow position: chr1:95177017-95176854 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 27

Conread position: 4-163
Cow position: chr1:25281578-25281742 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 67

Conread position: 4-164
Cow position: chr1:30189231-30189064 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 59

Conread position: 4-164
Cow position: chr1:33409546-33409707 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 63

Conread position: 4-164
Cow position: chr1:64572594-64572431 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 67

Conread position: 4-164
Cow position: chr1:92989669-92989507 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 64

Conread position: 4-164
Cow position: chr1:98311151-98310986 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 27

Conread position: 4-164
Cow position: chr1:101834894-101834741 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 27

Conread position: 4-165
Cow position: chr1:628045-627878 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 4-165
Cow position: chr1:6788204-6788369 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 65

Conread position: 4-165
Cow position: chr1:19466132-19465973 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 4-165
Cow position: chr1:19885460-19885300 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 40

Conread position: 4-165
Cow position: chr1:27145574-27145733 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 29

Conread position: 4-165
Cow position: chr1:34300472-34300633 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 99, 67

Conread position: 4-165
Cow position: chr1:36998264-36998112 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 4-165
Cow position: chr1:37309440-37309596 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 65

Conread position: 4-165
Cow position: chr1:42541677-42541513 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 67

Conread position: 4-165
Cow position: chr1:48581208-48581048 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 4-165
Cow position: chr1:55146877-55146719 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 4-165
Cow position: chr1:79165004-79165168 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 30

Conread position: 4-165
Cow position: chr1:85597017-85596858 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 99, 58

Conread position: 4-165
Cow position: chr1:90868362-90868524 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 67

Conread position: 4-165
Cow position: chr1:91816692-91816855 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 64

Conread position: 4-165
Cow position: chr1:92434079-92433917 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 67

Conread position: 4-165
Cow position: chr1:93528780-93528615 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 58

Conread position: 4-165
Cow position: chr1:95153301-95153136 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 64

Conread position: 4-165
Cow position: chr1:97939036-97938886 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 4-165
Cow position: chr1:100324670-100324827 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 4-165
Cow position: chr1:100552054-100551886 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 69

Conread position: 4-165
Cow position: chr1:102349671-102349837 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 99, 30

Conread position: 4-166
Cow position: chr1:24406818-24406978 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 36

Conread position: 4-166
Cow position: chr1:49433185-49433345 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 4-166
Cow position: chr1:65318654-65318492 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 64

Conread position: 4-166
Cow position: chr1:68763609-68763767 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 28

Conread position: 4-166
Cow position: chr1:71665853-71666017 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 63

Conread position: 4-166
Cow position: chr1:101632258-101632423 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 99, 64

Conread position: 4-168
Cow position: chr1:33913907-33913734 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 4-187
Cow position: chr1:58037097-58036914 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 30

Conread position: 5-164
Cow position: chr1:34771425-34771586 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 62

Conread position: 5-165
Cow position: chr1:12725449-12725609 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 87, 63

Conread position: 5-165
Cow position: chr1:20667664-20667825 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 104, 63

Conread position: 5-165
Cow position: chr1:96964394-96964237 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 105, 56

Conread position: 5-165
Cow position: chr1:99642291-99642449 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 63

Conread position: 6-159
Cow position: chr1:81913078-81913232 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 12

Conread position: 6-162
Cow position: chr1:52995101-52994940 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 65

Conread position: 6-165
Cow position: chr1:69694916-69695075 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 97, 54

Conread position: 8-165
Cow position: chr1:95179029-95178871 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 95, 60

Conread position: 9-165
Cow position: chr1:23512585-23512738 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 59

Conread position: 9-165
Cow position: chr1:54478403-54478241 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 94, 62

Conread position: 9-165
Cow position: chr1:56635172-56635012 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 65

Conread position: 9-165
Cow position: chr1:60281447-60281287 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 94, 62

Conread position: 9-165
Cow position: chr1:63434732-63434889 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 59

Conread position: 9-165
Cow position: chr1:77683426-77683274 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 9-165
Cow position: chr1:78079793-78079637 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 59

Conread position: 9-165
Cow position: chr1:79278373-79278530 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 31

Conread position: 9-165
Cow position: chr1:80422346-80422197 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 9-165
Cow position: chr1:102647199-102647355 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 90, 57

Conread position: 9-166
Cow position: chr1:48730758-48730909 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 49

Conread position: 9-166
Cow position: chr1:85550004-85550162 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 59

Conread position: 9-180
Cow position: chr1:9534234-9534073 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 159, 23

Conread position: 10-152
Cow position: chr1:96081553-96081410 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 57

Conread position: 10-162
Cow position: chr1:11226173-11226325 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 57

Conread position: 10-165
Cow position: chr1:78794158-78794308 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 10-165
Cow position: chr1:101946641-101946793 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 10-170
Cow position: chr1:42555339-42555176 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 59

Conread position: 10-177
Cow position: chr1:15028826-15028654 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 61

Conread position: 11-158
Cow position: chr1:6240210-6240355 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 49

Conread position: 11-163
Cow position: chr1:79660330-79660483 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 55

Conread position: 11-165
Cow position: chr1:12222535-12222687 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 11-165
Cow position: chr1:40482340-40482486 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 54

Conread position: 11-165
Cow position: chr1:42398119-42398277 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 57

Conread position: 11-165
Cow position: chr1:53374505-53374348 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 57

Conread position: 11-165
Cow position: chr1:56832703-56832857 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 56

Conread position: 11-165
Cow position: chr1:65103692-65103536 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 35

Conread position: 11-165
Cow position: chr1:100421897-100421749 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 11-165
Cow position: chr1:101837114-101836963 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 11-166
Cow position: chr1:42482274-42482119 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 57

Conread position: 11-166
Cow position: chr1:45285735-45285574 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 92, 57

Conread position: 11-166
Cow position: chr1:55428884-55429041 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 139

Conread position: 11-174
Cow position: chr1:1165671-1165508 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 91, 60

Conread position: 12-163
Cow position: chr1:24777922-24778067 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 31

Conread position: 12-177
Cow position: chr1:52052646-52052817 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 61

Conread position: 13-164
Cow position: chr1:75250180-75250029 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 47

Conread position: 13-165
Cow position: chr1:88618666-88618513 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 83, 54

Conread position: 15-164
Cow position: chr1:1991350-1991504 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 56

Conread position: 15-166
Cow position: chr1:47790594-47790750 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 53

Conread position: 15-186
Cow position: chr1:73458031-73458196 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 51

Conread position: 20-166
Cow position: chr1:54199316-54199466 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 48

Conread position: 21-165
Cow position: chr1:57395874-57396013 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 26-165
Cow position: chr1:24445571-24445711 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 76, 29

Conread position: 26-165
Cow position: chr1:57635516-57635378 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 77, 18

Conread position: 31-165
Cow position: chr1:76470705-76470572 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 29

Conread position: 31-180
Cow position: chr1:43447777-43447931 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 25

Conread position: 34-180
Cow position: chr1:93228571-93228427 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 13

Conread position: 37-163
Cow position: chr1:45535753-45535624 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 31

Conread position: 37-165
Cow position: chr1:24235473-24235600 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 34

Conread position: 37-165
Cow position: chr1:71045801-71045671 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 34

Conread position: 37-165
Cow position: chr1:95654667-95654795 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 31

Conread position: 37-166
Cow position: chr1:70028626-70028498 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 38-165
Cow position: chr1:71796265-71796397 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 30

Conread position: 39-165
Cow position: chr1:71716553-71716427 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 64, 10

Conread position: 44-165
Cow position: chr1:52956297-52956170 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 44-165
Cow position: chr1:61723980-61724105 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 65, 27

Conread position: 44-165
Cow position: chr1:68826865-68826988 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 27

Conread position: 44-165
Cow position: chr1:76019654-76019779 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 22

Conread position: 44-165
Cow position: chr1:96472478-96472362 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 44-191
Cow position: chr1:186235-186382 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 24

Conread position: 52-165
Cow position: chr1:51684838-51684718 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 16

Conread position: 52-184
Cow position: chr1:3137957-3137827 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 16

Show alignments to all cow chromosomes.