Cow genome map

Conread name: Tra1-TCH01C100080

Conread position: 1-158
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 68

Conread position: 1-164
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 42

Conread position: 1-164
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 68

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 47

Conread position: 1-165
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 72

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 67

Conread position: 1-166
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 110, 50

Conread position: 2-168
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 65

Conread position: 3-148
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 64

Conread position: 3-154
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 99, 61

Conread position: 3-160
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 65

Conread position: 3-163
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 64

Conread position: 3-163
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 64

Conread position: 3-164
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 68

Conread position: 3-164
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 41

Conread position: 3-164
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 3-164
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 68

Conread position: 3-164
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 72

Conread position: 3-164
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 101, 22

Conread position: 3-164
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 70

Conread position: 3-164
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 70

Conread position: 3-165
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 31

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 65

Conread position: 3-165
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 96, 65

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 69

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 64

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-165
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 96, 64

Conread position: 3-165
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 68

Conread position: 3-165
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 65

Conread position: 3-165
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 35, 66

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 104, 65

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 40

Conread position: 3-165
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 64

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 91, 22

Conread position: 3-165
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 70

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 3-165
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 98, 63

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 62

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 68

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 64

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 134
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 65

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 116, 25

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 64

Conread position: 3-165
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 65

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 7

Conread position: 3-165
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 12

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 8

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 52

Conread position: 3-166
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 63

Conread position: 3-166
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 3-166
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 65

Conread position: 3-166
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 24

Conread position: 3-167
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 94, 66

Conread position: 3-167
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 66

Conread position: 3-168
Cow position:
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 41

Conread position: 3-175
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 110, 10

Conread position: 3-201
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 4-158
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 99, 22

Conread position: 4-161
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 4-165
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 30

Conread position: 4-165
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 4-165
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 63

Conread position: 4-165
Cow position:
Alignm length: 168
Alignm identity: 138
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 99, 54

Conread position: 4-165
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 67

Conread position: 4-165
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 72

Conread position: 4-165
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 64

Conread position: 4-165
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 7

Conread position: 4-165
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 53

Conread position: 4-166
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 71

Conread position: 4-166
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 40

Conread position: 4-166
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 63

Conread position: 4-168
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 67

Conread position: 4-180
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 64

Conread position: 4-186
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 5-163
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 39

Conread position: 5-163
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 7, 64

Conread position: 5-165
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 5-165
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 62

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 20

Conread position: 6-165
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 97, 57

Conread position: 9-150
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 9-154
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 62

Conread position: 9-159
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 60

Conread position: 9-164
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 9-165
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 57

Conread position: 9-165
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 9-165
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 58

Conread position: 9-165
Cow position:
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 35

Conread position: 9-165
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 65

Conread position: 9-167
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 82, 58

Conread position: 10-165
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 58

Conread position: 10-174
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 55

Conread position: 11-158
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 36

Conread position: 11-163
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 56

Conread position: 11-165
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 29

Conread position: 11-165
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 38

Conread position: 11-165
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 57

Conread position: 12-165
Cow position:
Alignm length: 158
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 56

Conread position: 13-154
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 54

Conread position: 13-164
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 58

Conread position: 13-165
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 54

Conread position: 13-165
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 86, 58

Conread position: 13-165
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 55

Conread position: 17-165
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 26-166
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 42

Conread position: 33-164
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 40

Conread position: 39-165
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 29

Conread position: 41-164
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 27

Conread position: 41-164
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 30

Conread position: 44-159
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 24

Conread position: 46-149
Cow position:
Alignm length: 108
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 25

Conread position: 49-162
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 19

Conread position: 49-166
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 11

Conread position: 49-166
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 51-165
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 17

Conread position: 54-165
Cow position:
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 17

Show alignments to all cow chromosomes.