Cow genome map

Conread name: Tra1-TCH01C100080

Conread position: 1-146
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 68

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 1-157
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 72

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1-164
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 38

Conread position: 1-164
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 27

Conread position: 1-164
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 41

Conread position: 1-165
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 107, 42

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 102, 67

Conread position: 1-166
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 102, 43

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 2-140
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 66

Conread position: 3-140
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 6

Conread position: 3-140
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 3-140
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 103, 63

Conread position: 3-148
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 62

Conread position: 3-154
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 64

Conread position: 3-156
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 64

Conread position: 3-157
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 65

Conread position: 3-158
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 31

Conread position: 3-159
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 31

Conread position: 3-162
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 62

Conread position: 3-162
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 65

Conread position: 3-163
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 3-163
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 55

Conread position: 3-163
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 66

Conread position: 3-163
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 64

Conread position: 3-163
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 3-163
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 100, 36

Conread position: 3-164
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 66

Conread position: 3-164
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 66

Conread position: 3-164
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 3-164
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 52

Conread position: 3-164
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 99, 65

Conread position: 3-164
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 66

Conread position: 3-164
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 68

Conread position: 3-164
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 3-164
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 3-164
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 53

Conread position: 3-164
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 100, 41

Conread position: 3-164
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 68

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 33

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 101, 65

Conread position: 3-165
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 99, 41

Conread position: 3-165
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 68

Conread position: 3-165
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 96, 70

Conread position: 3-165
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 28

Conread position: 3-165
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 37

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 96, 22

Conread position: 3-165
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 46

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 3-165
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 88, 64

Conread position: 3-165
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 31

Conread position: 3-165
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 96, 65

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 40

Conread position: 3-165
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 31

Conread position: 3-165
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 64

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 65

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 64

Conread position: 3-165
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 64

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 88, 46

Conread position: 3-165
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 65

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 100, 37

Conread position: 3-165
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 68

Conread position: 3-165
Cow position:
Alignm length: 169
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 96, 66

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 107, 16

Conread position: 3-165
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 96, 65

Conread position: 3-166
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 100, 65

Conread position: 3-166
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 3-166
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 68

Conread position: 3-166
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 68

Conread position: 3-166
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 100, 65

Conread position: 3-166
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 46

Conread position: 3-172
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 40

Conread position: 3-179
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 65

Conread position: 3-180
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 68

Conread position: 3-180
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 64

Conread position: 3-181
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 109, 70

Conread position: 4-145
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 51

Conread position: 4-149
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 44

Conread position: 4-157
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 4-159
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 4-161
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 64

Conread position: 4-163
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 63

Conread position: 4-163
Cow position:
Alignm length: 166
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 107, 69

Conread position: 4-165
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 30

Conread position: 4-165
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 63

Conread position: 4-165
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 61

Conread position: 4-165
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 65

Conread position: 4-165
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 66

Conread position: 4-165
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 40

Conread position: 4-165
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 4-165
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 67

Conread position: 4-165
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 67

Conread position: 4-165
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 59

Conread position: 4-165
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 4-165
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 64

Conread position: 4-165
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 67

Conread position: 4-166
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 39

Conread position: 4-166
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 64, 45

Conread position: 4-167
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 65

Conread position: 4-172
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 66

Conread position: 4-184
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 45

Conread position: 6-165
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 6-165
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 61

Conread position: 6-165
Cow position:
Alignm length: 161
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 104, 52

Conread position: 8-165
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 61

Conread position: 8-165
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 95, 35

Conread position: 9-158
Cow position:
Alignm length: 150
Alignm identity: 122
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 9-164
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 95

Conread position: 9-165
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 9-165
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 64

Conread position: 9-169
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 10-158
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 10-165
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 58

Conread position: 10-174
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 93, 29

Conread position: 11-164
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 11-165
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 11-165
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 7

Conread position: 11-165
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 20

Conread position: 11-165
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 15

Conread position: 11-165
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 57

Conread position: 11-165
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 92, 62

Conread position: 13-143
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 54

Conread position: 13-165
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 90, 58

Conread position: 15-165
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 16-165
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 27

Conread position: 37-165
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 37-165
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 31

Conread position: 37-165
Cow position:
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 28

Conread position: 42-165
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 27

Conread position: 43-158
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 44-164
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 27

Conread position: 45-165
Cow position:
Alignm length: 124
Alignm identity: 107
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 26

Conread position: 45-180
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 26

Conread position: 49-164
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 19

Show alignments to all cow chromosomes.