Cow genome map
| Conread name: | Tra1-TCH01C100080 |
| Conread position: | 1-159 |
| Cow position: | chr21:28733773-28733934 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 62 |
| Conread position: | 1-165 |
| Cow position: | chr21:7377786-7377953 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 98, 66 |
| Conread position: | 1-165 |
| Cow position: | chr21:17929697-17929864 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 1-165 |
| Cow position: | chr21:28429584-28429417 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 1-165 |
| Cow position: | chr21:40432585-40432424 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-165 |
| Cow position: | chr21:47363594-47363764 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-183 |
| Cow position: | chr21:15976772-15976589 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 3-139 |
| Cow position: | chr21:36508372-36508241 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-145 |
| Cow position: | chr21:46132712-46132569 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 3-150 |
| Cow position: | chr21:6388137-6387989 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 3-150 |
| Cow position: | chr21:29405083-29405226 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 3-158 |
| Cow position: | chr21:13584923-13585073 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-158 |
| Cow position: | chr21:19258956-19258805 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 40 |
| Conread position: | 3-158 |
| Cow position: | chr21:28989751-28989589 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 3-162 |
| Cow position: | chr21:10264171-10264010 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 100, 63 |
| Conread position: | 3-163 |
| Cow position: | chr21:15584281-15584444 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-163 |
| Cow position: | chr21:36789933-36789767 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-163 |
| Cow position: | chr21:41621263-41621100 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-164 |
| Cow position: | chr21:396005-395845 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 113, 52 |
| Conread position: | 3-164 |
| Cow position: | chr21:6051641-6051482 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 3-164 |
| Cow position: | chr21:11644828-11644995 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 68 |
| Conread position: | 3-164 |
| Cow position: | chr21:13365480-13365313 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 96, 48 |
| Conread position: | 3-164 |
| Cow position: | chr21:33982672-33982831 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 41 |
| Conread position: | 3-164 |
| Cow position: | chr21:38449311-38449472 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 3-165 |
| Cow position: | chr21:33857-33695 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 92, 68 |
| Conread position: | 3-165 |
| Cow position: | chr21:47178-47011 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 3-165 |
| Cow position: | chr21:868786-868951 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 3-165 |
| Cow position: | chr21:977010-977171 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 65 |
| Conread position: | 3-165 |
| Cow position: | chr21:1511427-1511265 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 3-165 |
| Cow position: | chr21:1591692-1591526 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 98, 68 |
| Conread position: | 3-165 |
| Cow position: | chr21:3763605-3763765 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 112, 12 |
| Conread position: | 3-165 |
| Cow position: | chr21:5427078-5426915 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 102, 65 |
| Conread position: | 3-165 |
| Cow position: | chr21:5898264-5898425 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 100, 52 |
| Conread position: | 3-165 |
| Cow position: | chr21:6998085-6997914 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-165 |
| Cow position: | chr21:7581767-7581932 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 68 |
| Conread position: | 3-165 |
| Cow position: | chr21:9416389-9416222 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 3-165 |
| Cow position: | chr21:10001213-10001049 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 99, 65 |
| Conread position: | 3-165 |
| Cow position: | chr21:10004748-10004913 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 109, 31 |
| Conread position: | 3-165 |
| Cow position: | chr21:10410360-10410194 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 34 |
| Conread position: | 3-165 |
| Cow position: | chr21:10538117-10538276 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-165 |
| Cow position: | chr21:10561445-10561610 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 3-165 |
| Cow position: | chr21:10633502-10633666 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 3-165 |
| Cow position: | chr21:11251007-11250853 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-165 |
| Cow position: | chr21:14452372-14452210 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 63 |
| Conread position: | 3-165 |
| Cow position: | chr21:15544091-15544244 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 3-165 |
| Cow position: | chr21:15911538-15911374 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 101, 27 |
| Conread position: | 3-165 |
| Cow position: | chr21:17184055-17183897 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 62 |
| Conread position: | 3-165 |
| Cow position: | chr21:17890440-17890277 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 3-165 |
| Cow position: | chr21:19059955-19060113 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 3-165 |
| Cow position: | chr21:20160814-20160652 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-165 |
| Cow position: | chr21:22210108-22210270 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 3-165 |
| Cow position: | chr21:23587020-23586854 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 65 |
| Conread position: | 3-165 |
| Cow position: | chr21:25383164-25382988 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 3-165 |
| Cow position: | chr21:25628772-25628936 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 3-165 |
| Cow position: | chr21:26245052-26244894 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 3-165 |
| Cow position: | chr21:30231556-30231717 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 3-165 |
| Cow position: | chr21:30606948-30607115 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 3-165 |
| Cow position: | chr21:30848803-30848974 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-165 |
| Cow position: | chr21:31253671-31253518 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 3-165 |
| Cow position: | chr21:32339602-32339763 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-165 |
| Cow position: | chr21:34151723-34151558 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 40 |
| Conread position: | 3-165 |
| Cow position: | chr21:36795741-36795574 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 3-165 |
| Cow position: | chr21:38720387-38720226 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 3-165 |
| Cow position: | chr21:41878607-41878445 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 3-165 |
| Cow position: | chr21:41974240-41974401 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 3-165 |
| Cow position: | chr21:42007324-42007489 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 3-165 |
| Cow position: | chr21:42135478-42135646 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 115, 70 |
| Conread position: | 3-165 |
| Cow position: | chr21:42841459-42841626 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 100, 66 |
| Conread position: | 3-165 |
| Cow position: | chr21:45473620-45473778 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-165 |
| Cow position: | chr21:45920920-45921084 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-165 |
| Cow position: | chr21:46141186-46141018 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 3-165 |
| Cow position: | chr21:47763979-47764141 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 118, 65 |
| Conread position: | 3-166 |
| Cow position: | chr21:23321940-23322105 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 3-166 |
| Cow position: | chr21:28244608-28244442 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 100, 62 |
| Conread position: | 3-166 |
| Cow position: | chr21:33791243-33791393 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-166 |
| Cow position: | chr21:34390837-34391002 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-166 |
| Cow position: | chr21:36910069-36909908 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-166 |
| Cow position: | chr21:45971036-45971198 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 3-167 |
| Cow position: | chr21:641725-641558 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 3-174 |
| Cow position: | chr21:28924247-28924074 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-180 |
| Cow position: | chr21:3818347-3818167 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-194 |
| Cow position: | chr21:1764732-1764919 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 4-140 |
| Cow position: | chr21:13588897-13588761 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 4-155 |
| Cow position: | chr21:13036769-13036916 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 4-159 |
| Cow position: | chr21:45330470-45330621 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 4-164 |
| Cow position: | chr21:6713386-6713551 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-164 |
| Cow position: | chr21:28030425-28030263 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 40 |
| Conread position: | 4-164 |
| Cow position: | chr21:39401727-39401569 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 90, 19 |
| Conread position: | 4-165 |
| Cow position: | chr21:734726-734570 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 22 |
| Conread position: | 4-165 |
| Cow position: | chr21:2260229-2260387 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 4-165 |
| Cow position: | chr21:4399940-4399777 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 4-165 |
| Cow position: | chr21:19196027-19196188 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 64 |
| Conread position: | 4-165 |
| Cow position: | chr21:19766991-19766830 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 63 |
| Conread position: | 4-165 |
| Cow position: | chr21:20418545-20418710 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 4-165 |
| Cow position: | chr21:23980045-23980206 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 4-165 |
| Cow position: | chr21:29978623-29978786 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 99, 64 |
| Conread position: | 4-165 |
| Cow position: | chr21:37344964-37345123 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 4-165 |
| Cow position: | chr21:37789862-37790026 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 63 |
| Conread position: | 4-165 |
| Cow position: | chr21:40589345-40589511 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-166 |
| Cow position: | chr21:1059212-1059051 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 4-166 |
| Cow position: | chr21:10007502-10007666 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 63 |
| Conread position: | 4-166 |
| Cow position: | chr21:18155429-18155594 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 4-166 |
| Cow position: | chr21:18415189-18415025 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 4-166 |
| Cow position: | chr21:38900910-38900751 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 4-170 |
| Cow position: | chr21:19874218-19874384 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 4-174 |
| Cow position: | chr21:40192167-40192338 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 4-180 |
| Cow position: | chr21:30835500-30835321 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 4-181 |
| Cow position: | chr21:5464885-5464704 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 5-163 |
| Cow position: | chr21:47713872-47714029 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 5-165 |
| Cow position: | chr21:724749-724912 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 5-165 |
| Cow position: | chr21:37384619-37384459 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 62 |
| Conread position: | 5-165 |
| Cow position: | chr21:42209493-42209657 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 98, 66 |
| Conread position: | 5-181 |
| Cow position: | chr21:44515400-44515221 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 64 |
| Conread position: | 6-148 |
| Cow position: | chr21:7768573-7768425 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 62 |
| Conread position: | 6-163 |
| Cow position: | chr21:46848993-46849151 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 45 |
| Conread position: | 6-165 |
| Cow position: | chr21:24642655-24642494 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 6-165 |
| Cow position: | chr21:46144094-46143932 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 7-165 |
| Cow position: | chr21:33997093-33997253 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 8-162 |
| Cow position: | chr21:37235518-37235362 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 63 |
| Conread position: | 8-165 |
| Cow position: | chr21:13840459-13840299 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 9-163 |
| Cow position: | chr21:45355965-45355812 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 107, 62 |
| Conread position: | 9-165 |
| Cow position: | chr21:957804-957646 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 42 |
| Conread position: | 9-165 |
| Cow position: | chr21:20153088-20152928 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 59 |
| Conread position: | 9-165 |
| Cow position: | chr21:42384640-42384484 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 62 |
| Conread position: | 9-165 |
| Cow position: | chr21:43357124-43357284 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 9-166 |
| Cow position: | chr21:8235430-8235581 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 9-170 |
| Cow position: | chr21:42413965-42414132 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 9-172 |
| Cow position: | chr21:9940056-9940223 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 9-179 |
| Cow position: | chr21:26753623-26753458 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 10-165 |
| Cow position: | chr21:10673252-10673102 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 10-165 |
| Cow position: | chr21:31662598-31662439 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 59 |
| Conread position: | 11-154 |
| Cow position: | chr21:44724238-44724380 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 11-161 |
| Cow position: | chr21:48176950-48176803 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 33 |
| Conread position: | 11-165 |
| Cow position: | chr21:6834179-6834024 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 91, 57 |
| Conread position: | 11-165 |
| Cow position: | chr21:7394510-7394356 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 11-165 |
| Cow position: | chr21:11198018-11198174 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 11-165 |
| Cow position: | chr21:12461837-12461996 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 91, 60 |
| Conread position: | 11-165 |
| Cow position: | chr21:17875063-17875217 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 95, 56 |
| Conread position: | 11-165 |
| Cow position: | chr21:21907304-21907455 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 32 |
| Conread position: | 11-165 |
| Cow position: | chr21:27863383-27863541 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 60 |
| Conread position: | 11-165 |
| Cow position: | chr21:28919393-28919550 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 11-165 |
| Cow position: | chr21:41597941-41597795 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 11-165 |
| Cow position: | chr21:46551973-46552131 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 13-158 |
| Cow position: | chr21:12154261-12154114 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 57 |
| Conread position: | 13-163 |
| Cow position: | chr21:8206900-8206744 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 55 |
| Conread position: | 13-165 |
| Cow position: | chr21:5970710-5970864 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-165 |
| Cow position: | chr21:18064786-18064939 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 89, 55 |
| Conread position: | 14-165 |
| Cow position: | chr21:4281748-4281897 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 19-165 |
| Cow position: | chr21:10727399-10727251 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 21-165 |
| Cow position: | chr21:48075944-48076094 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 28-165 |
| Cow position: | chr21:37014293-37014428 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 28-167 |
| Cow position: | chr21:19513978-19513837 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 37-166 |
| Cow position: | chr21:13395695-13395571 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 38-163 |
| Cow position: | chr21:3380975-3381107 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 40-164 |
| Cow position: | chr21:6102160-6102285 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 41-165 |
| Cow position: | chr21:33359937-33360059 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 44-165 |
| Cow position: | chr21:11360133-11360013 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 44-165 |
| Cow position: | chr21:18790465-18790585 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 44-174 |
| Cow position: | chr21:8438727-8438858 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 51-170 |
| Cow position: | chr21:5454901-5455019 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 17 |
Show alignments to all cow chromosomes.