Cow genome map

Conread name: Tra1-TCH01C100080

Conread position: 1-148
Cow position: chr25:33256427-33256280 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 108, 62

Conread position: 1-164
Cow position: chr25:38982167-38982011 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 161, 38

Conread position: 1-165
Cow position: chr25:6688019-6687855 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 59

Conread position: 1-165
Cow position: chr25:12252735-12252904 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 61

Conread position: 1-165
Cow position: chr25:26087595-26087429 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 40

Conread position: 3-159
Cow position: chr25:12807110-12806958 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 31

Conread position: 3-160
Cow position: chr25:23817768-23817935 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 64

Conread position: 3-162
Cow position: chr25:11585590-11585428 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 68

Conread position: 3-162
Cow position: chr25:23244930-23245091 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 70

Conread position: 3-163
Cow position: chr25:19363987-19364150 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 69

Conread position: 3-164
Cow position: chr25:14196935-14196769 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 3-164
Cow position: chr25:26679298-26679137 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 70

Conread position: 3-164
Cow position: chr25:36036707-36036871 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 66

Conread position: 3-165
Cow position: chr25:1824025-1824187 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position: chr25:5474158-5474316 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 99, 64

Conread position: 3-165
Cow position: chr25:5846737-5846900 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 64

Conread position: 3-165
Cow position: chr25:5921016-5920849 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 64

Conread position: 3-165
Cow position: chr25:8157436-8157602 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 19

Conread position: 3-165
Cow position: chr25:12755407-12755582 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 73

Conread position: 3-165
Cow position: chr25:12840646-12840814 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 65

Conread position: 3-165
Cow position: chr25:13272641-13272475 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 106, 65

Conread position: 3-165
Cow position: chr25:13443338-13443505 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 69

Conread position: 3-165
Cow position: chr25:13569105-13569262 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 104, 15

Conread position: 3-165
Cow position: chr25:14791826-14791662 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 41

Conread position: 3-165
Cow position: chr25:17342530-17342364 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position: chr25:17474441-17474605 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 58

Conread position: 3-165
Cow position: chr25:17566659-17566496 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 64

Conread position: 3-165
Cow position: chr25:18564558-18564398 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 3-165
Cow position: chr25:20008205-20008043 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 69

Conread position: 3-165
Cow position: chr25:20069786-20069632 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 41

Conread position: 3-165
Cow position: chr25:20133242-20133404 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 104, 65

Conread position: 3-165
Cow position: chr25:21245532-21245695 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 70

Conread position: 3-165
Cow position: chr25:21894813-21894978 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 25

Conread position: 3-165
Cow position: chr25:25716718-25716561 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 37

Conread position: 3-165
Cow position: chr25:26089741-26089906 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 66

Conread position: 3-165
Cow position: chr25:27801350-27801195 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 3-165
Cow position: chr25:30619135-30618972 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 100, 41

Conread position: 3-165
Cow position: chr25:34242032-34242189 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 3-165
Cow position: chr25:36081947-36081785 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 65

Conread position: 3-165
Cow position: chr25:36120570-36120410 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 68

Conread position: 3-165
Cow position: chr25:36762177-36762015 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 66

Conread position: 3-166
Cow position: chr25:22750935-22751102 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 100, 62

Conread position: 3-166
Cow position: chr25:33686613-33686774 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 64

Conread position: 3-174
Cow position: chr25:26701099-26700930 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 41

Conread position: 3-190
Cow position: chr25:37594478-37594286 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 64

Conread position: 4-157
Cow position: chr25:35052551-35052705 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 115

Conread position: 4-158
Cow position: chr25:3373311-3373463 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 99, 43

Conread position: 4-158
Cow position: chr25:22730899-22730744 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 13

Conread position: 4-160
Cow position: chr25:26051974-26051814 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 65

Conread position: 4-164
Cow position: chr25:5407813-5407648 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 67

Conread position: 4-165
Cow position: chr25:3145915-3145753 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 62

Conread position: 4-165
Cow position: chr25:6961082-6961246 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 67

Conread position: 4-165
Cow position: chr25:7216895-7216739 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 35

Conread position: 4-165
Cow position: chr25:11066072-11066237 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 89, 61

Conread position: 4-165
Cow position: chr25:14513186-14513019 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 64

Conread position: 4-165
Cow position: chr25:18487739-18487579 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 67

Conread position: 4-165
Cow position: chr25:20076568-20076401 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 67

Conread position: 4-165
Cow position: chr25:20216904-20216742 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 14

Conread position: 4-165
Cow position: chr25:23779259-23779413 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 4-165
Cow position: chr25:28187874-28188038 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 108, 67

Conread position: 4-165
Cow position: chr25:30816960-30816794 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 99, 64

Conread position: 4-165
Cow position: chr25:36555618-36555781 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 97, 67

Conread position: 4-166
Cow position: chr25:15377397-15377233 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 35

Conread position: 4-166
Cow position: chr25:22296955-22297111 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 87, 30

Conread position: 4-171
Cow position: chr25:5920152-5919986 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 4-175
Cow position: chr25:18266235-18266056 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 4-181
Cow position: chr25:16921726-16921899 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 62

Conread position: 5-165
Cow position: chr25:14833591-14833750 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 74

Conread position: 6-158
Cow position: chr25:9349214-9349365 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 97, 54

Conread position: 6-164
Cow position: chr25:21893407-21893245 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 98, 65

Conread position: 6-165
Cow position: chr25:16714200-16714359 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 60

Conread position: 8-165
Cow position: chr25:12081255-12081412 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 85, 52

Conread position: 9-164
Cow position: chr25:61716-61570 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 9-164
Cow position: chr25:20785520-20785676 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 59

Conread position: 9-165
Cow position: chr25:18905951-18905794 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 59

Conread position: 9-165
Cow position: chr25:24651383-24651542 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 63

Conread position: 9-165
Cow position: chr25:34379039-34379199 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 64

Conread position: 9-165
Cow position: chr25:38425427-38425270 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 62

Conread position: 10-165
Cow position: chr25:7581366-7581516 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 10-165
Cow position: chr25:19317330-19317169 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 92, 27

Conread position: 10-170
Cow position: chr25:12932691-12932534 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 59

Conread position: 11-146
Cow position: chr25:35612249-35612384 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 58

Conread position: 11-160
Cow position: chr25:13384515-13384367 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 14

Conread position: 11-164
Cow position: chr25:33978154-33978306 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 35

Conread position: 11-165
Cow position: chr25:9002736-9002584 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 11-165
Cow position: chr25:25753932-25754088 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 11-165
Cow position: chr25:26224965-26225117 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 57

Conread position: 11-165
Cow position: chr25:26654971-26654818 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 33

Conread position: 15-165
Cow position: chr25:1838301-1838146 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 16-165
Cow position: chr25:7449859-7449715 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 17-164
Cow position: chr25:33205020-33205171 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 56

Conread position: 26-166
Cow position: chr25:13672444-13672301 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 42

Conread position: 37-165
Cow position: chr25:9957000-9957131 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 72, 31

Conread position: 38-165
Cow position: chr25:30450082-30449950 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 30

Conread position: 41-153
Cow position: chr25:11679178-11679064 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 34

Conread position: 41-165
Cow position: chr25:1735285-1735405 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 6, 28

Conread position: 44-165
Cow position: chr25:11315939-11315818 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 101

Conread position: 44-165
Cow position: chr25:25827502-25827377 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 24

Conread position: 44-165
Cow position: chr25:36779532-36779405 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 24

Conread position: 51-167
Cow position: chr25:13640405-13640290 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 19

Conread position: 67-157
Cow position: chr25:13754572-13754478 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 67-163
Cow position: chr25:23323209-23323115 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 73-165
Cow position: chr25:16001522-16001616 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.