Cow genome map
| Conread name: | Tra1-TCH01C100080 |
| Conread position: | 1-124 |
| Cow position: | chr26:32571386-32571264 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-164 |
| Cow position: | chr26:2739362-2739530 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-165 |
| Cow position: | chr26:12155030-12155190 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 1-165 |
| Cow position: | chr26:30254541-30254700 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-165 |
| Cow position: | chr26:20013568-20013405 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 3-142 |
| Cow position: | chr26:10751918-10751777 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 3-148 |
| Cow position: | chr26:22602947-22603095 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-160 |
| Cow position: | chr26:14481463-14481621 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 3-162 |
| Cow position: | chr26:22354504-22354344 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 103, 65 |
| Conread position: | 3-163 |
| Cow position: | chr26:6865115-6864945 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 3-163 |
| Cow position: | chr26:8643032-8642874 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 92, 50 |
| Conread position: | 3-163 |
| Cow position: | chr26:33011579-33011738 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 22 |
| Conread position: | 3-164 |
| Cow position: | chr26:798205-798370 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 3-164 |
| Cow position: | chr26:4854635-4854467 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 9 |
| Conread position: | 3-164 |
| Cow position: | chr26:7687154-7687312 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 3-164 |
| Cow position: | chr26:16922028-16921867 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 3-164 |
| Cow position: | chr26:19459784-19459613 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 63 |
| Conread position: | 3-164 |
| Cow position: | chr26:32955539-32955704 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 3-165 |
| Cow position: | chr26:586789-586948 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 3-165 |
| Cow position: | chr26:613582-613751 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 3-165 |
| Cow position: | chr26:1325848-1325696 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 3-165 |
| Cow position: | chr26:4585122-4585279 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 104, 41 |
| Conread position: | 3-165 |
| Cow position: | chr26:4807645-4807489 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 3-165 |
| Cow position: | chr26:5246387-5246552 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 3-165 |
| Cow position: | chr26:6794236-6794078 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 98, 64 |
| Conread position: | 3-165 |
| Cow position: | chr26:8811218-8811057 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 3-165 |
| Cow position: | chr26:10965503-10965662 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 3-165 |
| Cow position: | chr26:11263729-11263569 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 3-165 |
| Cow position: | chr26:12893336-12893498 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 3-165 |
| Cow position: | chr26:14905717-14905884 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 95, 70 |
| Conread position: | 3-165 |
| Cow position: | chr26:15200425-15200586 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 79, 43 |
| Conread position: | 3-165 |
| Cow position: | chr26:16550079-16549912 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 3-165 |
| Cow position: | chr26:19774208-19774374 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 3-165 |
| Cow position: | chr26:22152318-22152155 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 100, 66 |
| Conread position: | 3-165 |
| Cow position: | chr26:25526340-25526174 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 3-165 |
| Cow position: | chr26:32672337-32672509 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 3-165 |
| Cow position: | chr26:32776421-32776580 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 14 |
| Conread position: | 3-165 |
| Cow position: | chr26:33566953-33567118 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 3-165 |
| Cow position: | chr26:34060424-34060261 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 103, 65 |
| Conread position: | 3-165 |
| Cow position: | chr26:34106484-34106326 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 98, 31 |
| Conread position: | 3-165 |
| Cow position: | chr26:34108849-34108690 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 99, 46 |
| Conread position: | 3-165 |
| Cow position: | chr26:34314782-34314617 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 3-166 |
| Cow position: | chr26:21243186-21243028 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 101, 40 |
| Conread position: | 3-166 |
| Cow position: | chr26:23671507-23671340 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 3-166 |
| Cow position: | chr26:32836330-32836167 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 3-181 |
| Cow position: | chr26:8699956-8700136 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 4-165 |
| Cow position: | chr26:2986989-2987149 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 64 |
| Conread position: | 4-165 |
| Cow position: | chr26:6714212-6714366 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-165 |
| Cow position: | chr26:8353059-8352888 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 4-165 |
| Cow position: | chr26:9104191-9104352 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 4-165 |
| Cow position: | chr26:13979036-13979201 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 4-165 |
| Cow position: | chr26:17057769-17057610 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 4-165 |
| Cow position: | chr26:22249387-22249550 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 107, 64 |
| Conread position: | 4-165 |
| Cow position: | chr26:25394129-25393958 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-165 |
| Cow position: | chr26:31633818-31633656 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 95, 61 |
| Conread position: | 4-166 |
| Cow position: | chr26:25299689-25299527 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 108, 63 |
| Conread position: | 4-180 |
| Cow position: | chr26:33253226-33253408 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 4-185 |
| Cow position: | chr26:3706882-3706706 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-165 |
| Cow position: | chr26:15211892-15211729 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 66 |
| Conread position: | 6-165 |
| Cow position: | chr26:8310818-8310659 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 66 |
| Conread position: | 6-166 |
| Cow position: | chr26:26294108-26294270 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 52 |
| Conread position: | 8-150 |
| Cow position: | chr26:8202936-8202794 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 9-163 |
| Cow position: | chr26:18876877-18877028 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 9-166 |
| Cow position: | chr26:7315024-7315178 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 9-167 |
| Cow position: | chr26:13818509-13818349 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 9-186 |
| Cow position: | chr26:14578412-14578232 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 59 |
| Conread position: | 10-165 |
| Cow position: | chr26:6486567-6486727 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 61 |
| Conread position: | 10-168 |
| Cow position: | chr26:6470192-6470348 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 11-159 |
| Cow position: | chr26:10764295-10764148 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 11-165 |
| Cow position: | chr26:9604645-9604486 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 11-165 |
| Cow position: | chr26:16179645-16179491 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 101, 57 |
| Conread position: | 11-165 |
| Cow position: | chr26:21418369-21418525 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 24 |
| Conread position: | 11-166 |
| Cow position: | chr26:32834496-32834647 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 11-177 |
| Cow position: | chr26:21992185-21992017 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 13-180 |
| Cow position: | chr26:9839463-9839625 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 26-165 |
| Cow position: | chr26:6475359-6475503 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 28-164 |
| Cow position: | chr26:32842739-32842873 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 35-165 |
| Cow position: | chr26:6724166-6724039 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 42-165 |
| Cow position: | chr26:10767860-10767984 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 44-163 |
| Cow position: | chr26:20846674-20846556 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 98 |
| Conread position: | 51-180 |
| Cow position: | chr26:31779525-31779394 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 52-164 |
| Cow position: | chr26:18692463-18692352 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 70-166 |
| Cow position: | chr26:23925960-23926060 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.