Cow genome map


           Conread name:
           Tra1-TCH01C100080
        

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               101, 66
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               104, 25
               

               Conread position:
               2-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               108, 66
               

               Conread position:
               2-174
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 16
               

               Conread position:
               3-140
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               3-145
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               3-146
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-149
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               100, 10
               

               Conread position:
               3-157
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               3-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               96, 66
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               100, 64
               

               Conread position:
               3-162
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               94, 64
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 70
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               100, 66
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               98, 68
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               103, 65
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               91, 68
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               100, 41
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               96, 68
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               100, 63
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 70
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               88, 64
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               96, 65
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               100, 65
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 70
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 66
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               96, 65
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               100, 63
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               93, 64
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               96, 68
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 69
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 65
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               100, 64
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               100, 65
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               89, 64
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               3-169
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-170
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 68
               

               Conread position:
               3-180
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               3-180
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               88, 61
               

               Conread position:
               3-181
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               3-182
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               100, 48
               

               Conread position:
               4-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               4-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               88, 63
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 58
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               84, 65
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 64
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               99, 69
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 65
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               90, 67
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               4-172
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               4-172
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               6-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               97, 65
               

               Conread position:
               8-165
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 41
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 36
               

               Conread position:
               9-180
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               94, 59
               

               Conread position:
               10-165
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               11-151
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-165
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               11-165
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 57
               

               Conread position:
               11-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 61
               

               Conread position:
               11-165
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 56
               

               Conread position:
               11-165
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               107, 57
               

               Conread position:
               11-166
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               13-165
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               13-165
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               13-180
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 60
               

               Conread position:
               17-165
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               27-165
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               76, 41
               

               Conread position:
               37-165
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               43-164
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               44-164
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               46-166
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               75-166
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 0
               
Show alignments to all cow chromosomes.