Cow genome map
| Conread name: | Tra1-TCH01C100080 |
| Conread position: | 1-165 |
| Cow position: | chr5:458590-458427 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 109, 25 |
| Conread position: | 1-165 |
| Cow position: | chr5:16206053-16206219 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 1-165 |
| Cow position: | chr5:24349209-24349044 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 102, 67 |
| Conread position: | 1-165 |
| Cow position: | chr5:29903421-29903582 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 3-139 |
| Cow position: | chr5:49501724-49501863 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 3-144 |
| Cow position: | chr5:55795866-55796008 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 3-147 |
| Cow position: | chr5:31918742-31918599 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 3-147 |
| Cow position: | chr5:61784627-61784774 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 99, 62 |
| Conread position: | 3-158 |
| Cow position: | chr5:63987346-63987508 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 34 |
| Conread position: | 3-159 |
| Cow position: | chr5:29353025-29353192 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 65 |
| Conread position: | 3-159 |
| Cow position: | chr5:57737199-57737046 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 3-159 |
| Cow position: | chr5:61455944-61455787 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 96, 31 |
| Conread position: | 3-161 |
| Cow position: | chr5:57156212-57156375 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-162 |
| Cow position: | chr5:34625060-34624896 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 3-162 |
| Cow position: | chr5:44796633-44796792 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 102, 64 |
| Conread position: | 3-162 |
| Cow position: | chr5:45420037-45420195 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 91, 65 |
| Conread position: | 3-163 |
| Cow position: | chr5:2309456-2309618 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 102, 63 |
| Conread position: | 3-163 |
| Cow position: | chr5:42064305-42064141 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 3-163 |
| Cow position: | chr5:57935008-57935171 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 3-163 |
| Cow position: | chr5:72564864-72564700 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 100, 65 |
| Conread position: | 3-164 |
| Cow position: | chr5:18574272-18574110 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 27 |
| Conread position: | 3-164 |
| Cow position: | chr5:21617558-21617394 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 104, 70 |
| Conread position: | 3-164 |
| Cow position: | chr5:23357429-23357272 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 3-164 |
| Cow position: | chr5:28035843-28035678 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 101, 34 |
| Conread position: | 3-164 |
| Cow position: | chr5:30253841-30253677 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 73 |
| Conread position: | 3-164 |
| Cow position: | chr5:35247010-35247173 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 3-164 |
| Cow position: | chr5:43737863-43738017 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-164 |
| Cow position: | chr5:50637921-50637763 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 101, 57 |
| Conread position: | 3-164 |
| Cow position: | chr5:53710589-53710753 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 3-164 |
| Cow position: | chr5:54086638-54086480 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 111, 37 |
| Conread position: | 3-164 |
| Cow position: | chr5:62142776-62142607 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 3-165 |
| Cow position: | chr5:359839-360006 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 65 |
| Conread position: | 3-165 |
| Cow position: | chr5:3771946-3771784 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 3-165 |
| Cow position: | chr5:4031886-4032056 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 3-165 |
| Cow position: | chr5:7057302-7057464 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 3-165 |
| Cow position: | chr5:11427133-11427299 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 64 |
| Conread position: | 3-165 |
| Cow position: | chr5:11668085-11668249 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 102, 63 |
| Conread position: | 3-165 |
| Cow position: | chr5:12761018-12761176 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 3-165 |
| Cow position: | chr5:14550484-14550645 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-165 |
| Cow position: | chr5:18289222-18289066 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 40 |
| Conread position: | 3-165 |
| Cow position: | chr5:19335681-19335848 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 3-165 |
| Cow position: | chr5:19524000-19523836 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 3-165 |
| Cow position: | chr5:20128152-20127992 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 3-165 |
| Cow position: | chr5:21039883-21040037 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-165 |
| Cow position: | chr5:21828967-21828802 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 3-165 |
| Cow position: | chr5:26262579-26262738 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 96, 36 |
| Conread position: | 3-165 |
| Cow position: | chr5:28224552-28224390 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 100, 15 |
| Conread position: | 3-165 |
| Cow position: | chr5:29828147-29827985 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 100, 109 |
| Conread position: | 3-165 |
| Cow position: | chr5:32696723-32696885 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 3-165 |
| Cow position: | chr5:33560634-33560797 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 3-165 |
| Cow position: | chr5:34050218-34050052 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 3-165 |
| Cow position: | chr5:37189997-37190159 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 104, 65 |
| Conread position: | 3-165 |
| Cow position: | chr5:41165188-41165022 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 3-165 |
| Cow position: | chr5:43992424-43992258 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 3-165 |
| Cow position: | chr5:44847921-44848084 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 3-165 |
| Cow position: | chr5:47323562-47323401 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 3-165 |
| Cow position: | chr5:47704026-47704190 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 3-165 |
| Cow position: | chr5:51935289-51935128 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 3-165 |
| Cow position: | chr5:54311436-54311271 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 3-165 |
| Cow position: | chr5:55756315-55756489 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-165 |
| Cow position: | chr5:57575873-57575705 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 3-165 |
| Cow position: | chr5:57767885-57768045 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 3-165 |
| Cow position: | chr5:58446907-58446739 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 69 |
| Conread position: | 3-165 |
| Cow position: | chr5:58793507-58793673 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 102, 68 |
| Conread position: | 3-165 |
| Cow position: | chr5:58856202-58856040 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 3-165 |
| Cow position: | chr5:59626871-59627038 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 94, 69 |
| Conread position: | 3-165 |
| Cow position: | chr5:61840288-61840128 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-165 |
| Cow position: | chr5:64758667-64758835 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 99, 68 |
| Conread position: | 3-165 |
| Cow position: | chr5:67212461-67212292 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 3-165 |
| Cow position: | chr5:67932372-67932528 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 66 |
| Conread position: | 3-166 |
| Cow position: | chr5:15479226-15479059 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 64 |
| Conread position: | 3-166 |
| Cow position: | chr5:16893671-16893838 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 3-166 |
| Cow position: | chr5:35126155-35125988 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 3-166 |
| Cow position: | chr5:43604239-43604078 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 3-166 |
| Cow position: | chr5:63234729-63234891 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 3-174 |
| Cow position: | chr5:4280548-4280376 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 166 |
| Conread position: | 3-174 |
| Cow position: | chr5:5855958-5855789 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 3-174 |
| Cow position: | chr5:55068806-55068632 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 3-180 |
| Cow position: | chr5:51053549-51053728 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 52, 112 |
| Conread position: | 3-185 |
| Cow position: | chr5:1461189-1461004 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 3-186 |
| Cow position: | chr5:54350261-54350450 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 65 |
| Conread position: | 3-217 |
| Cow position: | chr5:63024924-63025150 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 187 |
| Conread position: | 4-158 |
| Cow position: | chr5:22643133-22643282 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 45 |
| Conread position: | 4-164 |
| Cow position: | chr5:12557188-12557355 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 4-164 |
| Cow position: | chr5:46022964-46023121 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 4-164 |
| Cow position: | chr5:73167912-73168064 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-165 |
| Cow position: | chr5:9089924-9090084 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 4-165 |
| Cow position: | chr5:13717470-13717631 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 4-165 |
| Cow position: | chr5:30949816-30949980 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 4-165 |
| Cow position: | chr5:34505827-34505991 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 4-165 |
| Cow position: | chr5:37808564-37808733 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 4-165 |
| Cow position: | chr5:38689439-38689607 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 99, 63 |
| Conread position: | 4-165 |
| Cow position: | chr5:39094649-39094491 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-165 |
| Cow position: | chr5:41294179-41294017 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 60 |
| Conread position: | 4-165 |
| Cow position: | chr5:52165079-52165242 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 99, 20 |
| Conread position: | 4-165 |
| Cow position: | chr5:52644981-52645143 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 112, 67 |
| Conread position: | 4-165 |
| Cow position: | chr5:54767810-54767973 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 4-165 |
| Cow position: | chr5:55929043-55928877 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 4-165 |
| Cow position: | chr5:59872981-59873155 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-165 |
| Cow position: | chr5:61492192-61492033 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 4-165 |
| Cow position: | chr5:66582063-66581901 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 4-166 |
| Cow position: | chr5:11769368-11769203 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 46 |
| Conread position: | 4-166 |
| Cow position: | chr5:49474446-49474614 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 4-166 |
| Cow position: | chr5:54060375-54060212 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 99, 51 |
| Conread position: | 4-166 |
| Cow position: | chr5:55019391-55019230 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 4-166 |
| Cow position: | chr5:64137355-64137189 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 4-174 |
| Cow position: | chr5:23529183-23529355 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 4-180 |
| Cow position: | chr5:50858033-50857856 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 4-182 |
| Cow position: | chr5:58555236-58555056 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 161, 63 |
| Conread position: | 4-184 |
| Cow position: | chr5:57639875-57640052 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 170, 103 |
| Conread position: | 5-165 |
| Cow position: | chr5:16509204-16509032 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 5-165 |
| Cow position: | chr5:30805262-30805104 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 5-165 |
| Cow position: | chr5:36855304-36855141 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 5-165 |
| Cow position: | chr5:57526824-57526982 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 6-165 |
| Cow position: | chr5:40039669-40039834 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 7-163 |
| Cow position: | chr5:50575880-50575723 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 7-165 |
| Cow position: | chr5:42744877-42744724 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 9-163 |
| Cow position: | chr5:66972523-66972366 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 91, 59 |
| Conread position: | 9-165 |
| Cow position: | chr5:18899069-18898914 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 9-165 |
| Cow position: | chr5:23678608-23678766 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 9-165 |
| Cow position: | chr5:28945966-28946126 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 86, 53 |
| Conread position: | 9-165 |
| Cow position: | chr5:35969626-35969477 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 9-165 |
| Cow position: | chr5:56635989-56635837 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 59 |
| Conread position: | 9-165 |
| Cow position: | chr5:60747186-60747342 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 34 |
| Conread position: | 9-165 |
| Cow position: | chr5:73080299-73080136 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 9-166 |
| Cow position: | chr5:49685177-49685335 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 59 |
| Conread position: | 9-170 |
| Cow position: | chr5:27411307-27411466 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 9-180 |
| Cow position: | chr5:17028189-17028016 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 94, 62 |
| Conread position: | 9-182 |
| Cow position: | chr5:16214781-16214602 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 94, 59 |
| Conread position: | 10-165 |
| Cow position: | chr5:55956001-55955843 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 36, 40 |
| Conread position: | 11-158 |
| Cow position: | chr5:34528639-34528498 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 92, 23 |
| Conread position: | 11-164 |
| Cow position: | chr5:42845501-42845660 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 11-165 |
| Cow position: | chr5:31475774-31475620 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 92, 56 |
| Conread position: | 11-165 |
| Cow position: | chr5:33834134-33833980 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 87, 54 |
| Conread position: | 11-165 |
| Cow position: | chr5:45273409-45273564 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 11-165 |
| Cow position: | chr5:55966788-55966943 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 11-166 |
| Cow position: | chr5:4221070-4220919 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 11-166 |
| Cow position: | chr5:20843303-20843465 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 82, 57 |
| Conread position: | 11-172 |
| Cow position: | chr5:37646451-37646619 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 12-165 |
| Cow position: | chr5:53855797-53855634 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 12-174 |
| Cow position: | chr5:41713387-41713223 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 91, 43 |
| Conread position: | 13-163 |
| Cow position: | chr5:50215471-50215617 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-164 |
| Cow position: | chr5:46080050-46080199 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 13-180 |
| Cow position: | chr5:46129577-46129741 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 14-166 |
| Cow position: | chr5:22445997-22445848 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 139, 29 |
| Conread position: | 18-165 |
| Cow position: | chr5:46122268-46122414 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 22-164 |
| Cow position: | chr5:25447645-25447500 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 30-165 |
| Cow position: | chr5:56820188-56820326 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 37-165 |
| Cow position: | chr5:29979916-29980051 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 37-165 |
| Cow position: | chr5:72286849-72286977 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 116, 31 |
| Conread position: | 37-166 |
| Cow position: | chr5:2500113-2500249 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 38-166 |
| Cow position: | chr5:21964354-21964222 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 40-165 |
| Cow position: | chr5:52000286-52000158 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 44-166 |
| Cow position: | chr5:34300978-34300851 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 48-166 |
| Cow position: | chr5:51800917-51801037 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 54-166 |
| Cow position: | chr5:34115702-34115585 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 19 |
Show alignments to all cow chromosomes.