Cow genome map


           Conread name:
           Tra1-TCH01D020044
        

               Conread position:
               311-701
               

               Cow position:
               chr25:20144802-20144419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               177, 14
               

               Conread position:
               311-707
               

               Cow position:
               chr25:15594105-15593705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               279
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               316-707
               

               Cow position:
               chr25:11332480-11332888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               285
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               318-707
               

               Cow position:
               chr25:22216891-22216500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 47
               

               Conread position:
               324-662
               

               Cow position:
               chr25:7629335-7629006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               164, 55
               

               Conread position:
               325-603
               

               Cow position:
               chr25:41167431-41167145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               325-636
               

               Cow position:
               chr25:16044522-16044831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               82, 12
               

               Conread position:
               403-702
               

               Cow position:
               chr25:6937658-6937357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               424-701
               

               Cow position:
               chr25:18568173-18568447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               37, 97
               
Show alignments to all cow chromosomes.