Cow genome map


           Conread name:
           Tra1-TCH01D020098
        

               Conread position:
               459-745
               

               Cow position:
               chr10:21381732-21382001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               460-794
               

               Cow position:
               chr10:24314658-24314320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               467-729
               

               Cow position:
               chr10:182710-182971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 30
               

               Conread position:
               476-676
               

               Cow position:
               chr10:20396070-20396269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               99, 51
               

               Conread position:
               485-789
               

               Cow position:
               chr10:53363177-53363477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               550-773
               

               Cow position:
               chr10:24979060-24978834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               550-788
               

               Cow position:
               chr10:6262021-6261790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               97, 41
               

               Conread position:
               575-789
               

               Cow position:
               chr10:8215594-8215380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               132, 175
               

               Conread position:
               596-794
               

               Cow position:
               chr10:21075657-21075856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 134
               
Show alignments to all cow chromosomes.