Cow genome map


           Conread name:
           Tra1-TCH01D020098
        

               Conread position:
               452-767
               

               Cow position:
               chr11:44229898-44230210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               100, 48
               

               Conread position:
               453-794
               

               Cow position:
               chr11:8293151-8293484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               465-789
               

               Cow position:
               chr11:2336808-2337127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 71
               

               Conread position:
               466-789
               

               Cow position:
               chr11:44896172-44895856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               549-785
               

               Cow position:
               chr11:10218678-10218440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               552-789
               

               Cow position:
               chr11:28062337-28062571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               576-788
               

               Cow position:
               chr11:9416732-9416521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               624-788
               

               Cow position:
               chr11:36761048-36761209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               629-757
               

               Cow position:
               chr11:28661790-28661918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               650-789
               

               Cow position:
               chr11:38006345-38006204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 46
               
Show alignments to all cow chromosomes.