Cow genome map
| Conread name: | Tra1-TCH01D020098 |
| Conread position: | 452-789 |
| Cow position: | chr16:34502577-34502907 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 457-681 |
| Cow position: | chr16:23211892-23212116 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 67 |
| Conread position: | 460-777 |
| Cow position: | chr16:41759673-41759355 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 46 |
| Conread position: | 462-788 |
| Cow position: | chr16:16819223-16818897 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 462-794 |
| Cow position: | chr16:22811199-22810869 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 462-794 |
| Cow position: | chr16:25292753-25293084 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 463-690 |
| Cow position: | chr16:13017005-13017233 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 473-706 |
| Cow position: | chr16:16962958-16963187 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 77, 31 |
| Conread position: | 473-788 |
| Cow position: | chr16:55080857-55080543 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 475-793 |
| Cow position: | chr16:51684850-51685167 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 480-792 |
| Cow position: | chr16:42186779-42186475 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 48 |
| Conread position: | 497-787 |
| Cow position: | chr16:45410400-45410114 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 536-788 |
| Cow position: | chr16:20235141-20235397 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 545-788 |
| Cow position: | chr16:24155947-24155704 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 550-787 |
| Cow position: | chr16:25166309-25166545 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 551-788 |
| Cow position: | chr16:14668774-14669013 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 576-788 |
| Cow position: | chr16:23873029-23872828 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 123 |
| Conread position: | 625-793 |
| Cow position: | chr16:28154960-28155123 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 648-771 |
| Cow position: | chr16:28439193-28439070 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.