Cow genome map


           Conread name:
           Tra1-TCH01D020098
        

               Conread position:
               460-786
               

               Cow position:
               chr5:6179264-6179570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               209, 67
               

               Conread position:
               467-783
               

               Cow position:
               chr5:53628332-53628020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               469-794
               

               Cow position:
               chr5:46795501-46795824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               479-794
               

               Cow position:
               chr5:39870957-39871254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               523-794
               

               Cow position:
               chr5:62162787-62162512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 230
               

               Conread position:
               534-794
               

               Cow position:
               chr5:58056754-58056492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               648-789
               

               Cow position:
               chr5:57366893-57366752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               650-794
               

               Cow position:
               chr5:24109963-24109818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               99, 0
               
Show alignments to all cow chromosomes.