Cow genome map


           Conread name:
           Tra1-TCH01D090010
        

               Conread position:
               1-136
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               3-122
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-127
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-130
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-130
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 11
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 85
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-137
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-137
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-163
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               130, 11
               

               Conread position:
               3-206
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 38
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               107, 11
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               98, 68
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               104, 208
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               3-224
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               121, 11
               

               Conread position:
               4-122
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               4-195
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               4-217
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               5-122
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               5-122
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               5-137
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               5-198
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               85, 20
               

               Conread position:
               5-212
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               131, 9
               

               Conread position:
               5-217
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               6-223
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 42
               

               Conread position:
               7-137
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               9-131
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               11-131
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-212
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 60
               

               Conread position:
               12-121
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               12-160
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 50
               

               Conread position:
               12-196
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 153
               

               Conread position:
               12-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 188
               

               Conread position:
               12-218
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               121, 93
               

               Conread position:
               12-223
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               12-224
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               13-218
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               13-242
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               119, 242
               

               Conread position:
               18-223
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 50
               

               Conread position:
               19-223
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               20-217
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               91, 65
               

               Conread position:
               20-244
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               104, 135
               

               Conread position:
               21-241
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               23-223
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 131
               

               Conread position:
               36-218
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               127-213
               

               Cow position:
               
               

               Alignm length:
               87
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-214
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.