Cow genome map

Conread name: Tra1-TCH01D090010

Conread position: 1-131
Cow position: chr11:62789314-62789187 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-131
Cow position: chr11:63165463-63165590 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 1-137
Cow position: chr11:30986823-30986689 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 2-121
Cow position: chr11:83323765-83323646 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr11:73638041-73637920 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 11

Conread position: 3-122
Cow position: chr11:40818446-40818561 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 3-123
Cow position: chr11:63547005-63546886 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-127
Cow position: chr11:65431703-65431579 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 92, 11

Conread position: 3-131
Cow position: chr11:6154755-6154627 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr11:32586940-32587067 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 3-131
Cow position: chr11:63977241-63977114 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 3-131
Cow position: chr11:83043181-83043306 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 3-175
Cow position: chr11:43736921-43737098 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 76, 11

Conread position: 3-211
Cow position: chr11:13061068-13061282 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 11

Conread position: 3-211
Cow position: chr11:77013957-77013739 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 166

Conread position: 3-212
Cow position: chr11:51729461-51729240 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 3-213
Cow position: chr11:47899436-47899221 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 11

Conread position: 3-215
Cow position: chr11:21728102-21728325 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 27

Conread position: 3-216
Cow position: chr11:33824728-33824938 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 11

Conread position: 3-217
Cow position: chr11:16342061-16342280 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 64, 115

Conread position: 3-218
Cow position: chr11:39115659-39115443 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 23

Conread position: 4-131
Cow position: chr11:52297037-52297164 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 84

Conread position: 4-138
Cow position: chr11:67614740-67614872 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 4-217
Cow position: chr11:55911462-55911685 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 10

Conread position: 5-211
Cow position: chr11:18915193-18914980 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 92, 9

Conread position: 5-215
Cow position: chr11:82740676-82740460 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 74, 9

Conread position: 5-223
Cow position: chr11:75874588-75874812 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 9

Conread position: 6-112
Cow position: chr11:6784388-6784283 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 6-153
Cow position: chr11:62812769-62812917 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 13

Conread position: 6-207
Cow position: chr11:711643-711450 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 6-217
Cow position: chr11:27248672-27248441 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 0

Conread position: 11-131
Cow position: chr11:29960471-29960352 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 12-181
Cow position: chr11:15607811-15607987 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 139

Conread position: 12-212
Cow position: chr11:62490599-62490390 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 27

Conread position: 12-215
Cow position: chr11:69392707-69392513 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 12-217
Cow position: chr11:4602329-4602127 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 70

Conread position: 12-219
Cow position: chr11:64044395-64044180 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 12-221
Cow position: chr11:55494842-55494624 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 33

Conread position: 13-120
Cow position: chr11:63866484-63866591 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 24-213
Cow position: chr11:2907368-2907570 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 130, 14

Conread position: 27-214
Cow position: chr11:81162284-81162481 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 36-217
Cow position: chr11:10213431-10213615 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 58

Conread position: 38-218
Cow position: chr11:80537624-80537436 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 92-217
Cow position: chr11:53906449-53906580 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 127-216
Cow position: chr11:54218753-54218664 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 127-218
Cow position: chr11:53553257-53553167 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.