Cow genome map
Conread name: | Tra1-TCH01D090010 |
Conread position: | 1-131 |
Cow position: | chr11:62789314-62789187 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 1-131 |
Cow position: | chr11:63165463-63165590 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 1-137 |
Cow position: | chr11:30986823-30986689 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 2-121 |
Cow position: | chr11:83323765-83323646 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-121 |
Cow position: | chr11:73638041-73637920 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 74, 11 |
Conread position: | 3-122 |
Cow position: | chr11:40818446-40818561 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 3-123 |
Cow position: | chr11:63547005-63546886 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 95 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-127 |
Cow position: | chr11:65431703-65431579 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 92, 11 |
Conread position: | 3-131 |
Cow position: | chr11:6154755-6154627 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-131 |
Cow position: | chr11:32586940-32587067 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-131 |
Cow position: | chr11:63977241-63977114 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 3-131 |
Cow position: | chr11:83043181-83043306 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-175 |
Cow position: | chr11:43736921-43737098 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 143 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 76, 11 |
Conread position: | 3-211 |
Cow position: | chr11:13061068-13061282 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 158 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 74, 11 |
Conread position: | 3-211 |
Cow position: | chr11:77013957-77013739 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 82, 166 |
Conread position: | 3-212 |
Cow position: | chr11:51729461-51729240 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 161 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 3-213 |
Cow position: | chr11:47899436-47899221 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 166 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 101, 11 |
Conread position: | 3-215 |
Cow position: | chr11:21728102-21728325 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 162 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 86, 27 |
Conread position: | 3-216 |
Cow position: | chr11:33824728-33824938 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 156 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 140, 11 |
Conread position: | 3-217 |
Cow position: | chr11:16342061-16342280 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 166 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 64, 115 |
Conread position: | 3-218 |
Cow position: | chr11:39115659-39115443 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 154 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 73, 23 |
Conread position: | 4-131 |
Cow position: | chr11:52297037-52297164 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 73, 84 |
Conread position: | 4-138 |
Cow position: | chr11:67614740-67614872 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 4-217 |
Cow position: | chr11:55911462-55911685 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 159 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 75, 10 |
Conread position: | 5-211 |
Cow position: | chr11:18915193-18914980 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 92, 9 |
Conread position: | 5-215 |
Cow position: | chr11:82740676-82740460 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 158 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 74, 9 |
Conread position: | 5-223 |
Cow position: | chr11:75874588-75874812 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 157 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 106, 9 |
Conread position: | 6-112 |
Cow position: | chr11:6784388-6784283 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 88 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 6-153 |
Cow position: | chr11:62812769-62812917 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 20, 13 |
Conread position: | 6-207 |
Cow position: | chr11:711643-711450 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 142 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 6-217 |
Cow position: | chr11:27248672-27248441 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 167 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 11-131 |
Cow position: | chr11:29960471-29960352 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 95 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 12-181 |
Cow position: | chr11:15607811-15607987 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 75, 139 |
Conread position: | 12-212 |
Cow position: | chr11:62490599-62490390 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 157 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 65, 27 |
Conread position: | 12-215 |
Cow position: | chr11:69392707-69392513 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 150 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 12-217 |
Cow position: | chr11:4602329-4602127 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 148 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 34, 70 |
Conread position: | 12-219 |
Cow position: | chr11:64044395-64044180 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 151 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 12-221 |
Cow position: | chr11:55494842-55494624 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 155 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 88, 33 |
Conread position: | 13-120 |
Cow position: | chr11:63866484-63866591 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 89 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 24-213 |
Cow position: | chr11:2907368-2907570 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 130, 14 |
Conread position: | 27-214 |
Cow position: | chr11:81162284-81162481 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 147 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 36-217 |
Cow position: | chr11:10213431-10213615 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 130 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 25, 58 |
Conread position: | 38-218 |
Cow position: | chr11:80537624-80537436 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 92-217 |
Cow position: | chr11:53906449-53906580 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 127-216 |
Cow position: | chr11:54218753-54218664 (view UCSC Genome Browser custom track) |
Alignm length: | 90 |
Alignm identity: | 81 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 127-218 |
Cow position: | chr11:53553257-53553167 (view UCSC Genome Browser custom track) |
Alignm length: | 92 |
Alignm identity: | 80 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.