Cow genome map
| Conread name: | Tra1-TCH01D090010 |
| Conread position: | 1-218 |
| Cow position: | chr14:36151162-36151375 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 3-122 |
| Cow position: | chr14:11576909-11577029 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 3-127 |
| Cow position: | chr14:20640789-20640665 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 96, 11 |
| Conread position: | 3-131 |
| Cow position: | chr14:25903371-25903499 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-137 |
| Cow position: | chr14:42155128-42154997 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3-217 |
| Cow position: | chr14:2344933-2345143 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 3-220 |
| Cow position: | chr14:49501169-49500944 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 4-127 |
| Cow position: | chr14:21224484-21224605 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-137 |
| Cow position: | chr14:22988876-22989008 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-213 |
| Cow position: | chr14:21284494-21284694 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-217 |
| Cow position: | chr14:13845835-13846061 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 98, 15 |
| Conread position: | 4-218 |
| Cow position: | chr14:16256615-16256843 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 4-221 |
| Cow position: | chr14:33791034-33791268 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 132, 10 |
| Conread position: | 5-121 |
| Cow position: | chr14:38747521-38747636 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 5-218 |
| Cow position: | chr14:42513575-42513354 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 6-212 |
| Cow position: | chr14:15997909-15997694 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 69 |
| Conread position: | 9-218 |
| Cow position: | chr14:23080909-23080690 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 12-131 |
| Cow position: | chr14:20110874-20110754 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 12-131 |
| Cow position: | chr14:48426920-48427042 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-218 |
| Cow position: | chr14:16550146-16549926 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 77, 26 |
| Conread position: | 12-233 |
| Cow position: | chr14:42596242-42596474 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 17-213 |
| Cow position: | chr14:28803866-28803675 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 96 |
| Conread position: | 18-130 |
| Cow position: | chr14:11280259-11280146 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 19-210 |
| Cow position: | chr14:41838004-41837803 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 38-217 |
| Cow position: | chr14:2038919-2038731 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 118-217 |
| Cow position: | chr14:28115210-28115111 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-212 |
| Cow position: | chr14:10078254-10078339 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-217 |
| Cow position: | chr14:41325461-41325371 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.