Cow genome map


           Conread name:
           Tra1-TCH01D090010
        

               Conread position:
               1-127
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               2-131
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               3-117
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 42
               

               Conread position:
               3-127
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               3-127
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               3-130
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-137
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               137, 11
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 40
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               128, 86
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               3-218
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               3-218
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-223
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               3-231
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               4-131
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               98, 10
               

               Conread position:
               5-122
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               5-138
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               5-198
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               100, 14
               

               Conread position:
               5-213
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-219
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 9
               

               Conread position:
               6-122
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               9-216
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               12-122
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-131
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-214
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               12-217
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               12-223
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 146
               

               Conread position:
               13-214
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               75, 57
               

               Conread position:
               19-127
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               19-131
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               19-131
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-214
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               54, 123
               

               Conread position:
               19-218
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               20-122
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-217
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               23-217
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               37-217
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 187
               

               Conread position:
               37-241
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               122-213
               

               Cow position:
               
               

               Alignm length:
               92
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 0
               
Show alignments to all cow chromosomes.