Cow genome map
Conread name: | Tra1-TCH01D090010 |
Conread position: | 1-127 |
Cow position: | chr18:9366094-9365966 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-217 |
Cow position: | chr18:49100215-49100435 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 91, 10 |
Conread position: | 2-174 |
Cow position: | chr18:11814470-11814302 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 167, 74 |
Conread position: | 2-180 |
Cow position: | chr18:35581884-35582068 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 133 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 75, 11 |
Conread position: | 3-119 |
Cow position: | chr18:51383229-51383344 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-122 |
Cow position: | chr18:6310250-6310132 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 3-122 |
Cow position: | chr18:49441011-49440891 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 101 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 57, 12 |
Conread position: | 3-127 |
Cow position: | chr18:12023470-12023592 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 96, 11 |
Conread position: | 3-127 |
Cow position: | chr18:25598063-25598187 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 96 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-127 |
Cow position: | chr18:34444568-34444691 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-131 |
Cow position: | chr18:8170922-8171044 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 3-131 |
Cow position: | chr18:9974161-9974287 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-131 |
Cow position: | chr18:47824605-47824732 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-131 |
Cow position: | chr18:49602873-49603002 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 88, 11 |
Conread position: | 3-131 |
Cow position: | chr18:50632275-50632401 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 3-138 |
Cow position: | chr18:38937989-38937855 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 101 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-138 |
Cow position: | chr18:50004537-50004671 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-153 |
Cow position: | chr18:15517003-15517154 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 110 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 3-207 |
Cow position: | chr18:50082111-50082314 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 150 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 72, 55 |
Conread position: | 3-212 |
Cow position: | chr18:30586066-30586283 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 157 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 86, 163 |
Conread position: | 3-214 |
Cow position: | chr18:50095239-50095462 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 169 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 3-218 |
Cow position: | chr18:25006335-25006561 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 162 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 4-127 |
Cow position: | chr18:22789922-22790043 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 4-131 |
Cow position: | chr18:1571071-1571196 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 45, 10 |
Conread position: | 4-209 |
Cow position: | chr18:20462539-20462754 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 161 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 96, 10 |
Conread position: | 4-215 |
Cow position: | chr18:41257749-41257967 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 151 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 95, 10 |
Conread position: | 5-172 |
Cow position: | chr18:32960247-32960082 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 128 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 6, 15 |
Conread position: | 5-202 |
Cow position: | chr18:9846251-9846462 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 5-209 |
Cow position: | chr18:49981291-49981498 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 106, 9 |
Conread position: | 5-211 |
Cow position: | chr18:1735431-1735643 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 150 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 73, 13 |
Conread position: | 5-213 |
Cow position: | chr18:41950380-41950146 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 171 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 66, 9 |
Conread position: | 7-122 |
Cow position: | chr18:51398169-51398283 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 94 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 7-209 |
Cow position: | chr18:20126458-20126248 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 149 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 91, 139 |
Conread position: | 12-212 |
Cow position: | chr18:18592625-18592411 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 153 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 12-212 |
Cow position: | chr18:47183152-47183355 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 54, 20 |
Conread position: | 12-215 |
Cow position: | chr18:22180620-22180846 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 174 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 112, 68 |
Conread position: | 12-217 |
Cow position: | chr18:38806728-38806519 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 79, 51 |
Conread position: | 13-122 |
Cow position: | chr18:18520641-18520751 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 13-215 |
Cow position: | chr18:33300045-33299840 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 148 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 84, 22 |
Conread position: | 19-131 |
Cow position: | chr18:44548592-44548705 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 90 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 19-131 |
Cow position: | chr18:45903742-45903856 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 91 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 19-217 |
Cow position: | chr18:31711423-31711631 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 148 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 20-217 |
Cow position: | chr18:2146439-2146646 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 157 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 62, 50 |
Conread position: | 23-215 |
Cow position: | chr18:11685107-11684917 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 142 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 83, 18 |
Conread position: | 127-207 |
Cow position: | chr18:23505354-23505274 (view UCSC Genome Browser custom track) |
Alignm length: | 81 |
Alignm identity: | 73 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 127-217 |
Cow position: | chr18:49038485-49038395 (view UCSC Genome Browser custom track) |
Alignm length: | 91 |
Alignm identity: | 79 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.