Cow genome map

Conread name: Tra1-TCH01D090010

Conread position: 1-127
Cow position: chr18:9366094-9365966 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 1-217
Cow position: chr18:49100215-49100435 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 91, 10

Conread position: 2-174
Cow position: chr18:11814470-11814302 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 167, 74

Conread position: 2-180
Cow position: chr18:35581884-35582068 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 11

Conread position: 3-119
Cow position: chr18:51383229-51383344 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 3-122
Cow position: chr18:6310250-6310132 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 3-122
Cow position: chr18:49441011-49440891 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 12

Conread position: 3-127
Cow position: chr18:12023470-12023592 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 11

Conread position: 3-127
Cow position: chr18:25598063-25598187 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-127
Cow position: chr18:34444568-34444691 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-131
Cow position: chr18:8170922-8171044 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-131
Cow position: chr18:9974161-9974287 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 3-131
Cow position: chr18:47824605-47824732 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 3-131
Cow position: chr18:49602873-49603002 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 88, 11

Conread position: 3-131
Cow position: chr18:50632275-50632401 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 3-138
Cow position: chr18:38937989-38937855 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 3-138
Cow position: chr18:50004537-50004671 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 3-153
Cow position: chr18:15517003-15517154 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 3-207
Cow position: chr18:50082111-50082314 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 55

Conread position: 3-212
Cow position: chr18:30586066-30586283 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 163

Conread position: 3-214
Cow position: chr18:50095239-50095462 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 3-218
Cow position: chr18:25006335-25006561 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 4-127
Cow position: chr18:22789922-22790043 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 4-131
Cow position: chr18:1571071-1571196 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 10

Conread position: 4-209
Cow position: chr18:20462539-20462754 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 10

Conread position: 4-215
Cow position: chr18:41257749-41257967 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 10

Conread position: 5-172
Cow position: chr18:32960247-32960082 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 15

Conread position: 5-202
Cow position: chr18:9846251-9846462 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 5-209
Cow position: chr18:49981291-49981498 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 9

Conread position: 5-211
Cow position: chr18:1735431-1735643 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 13

Conread position: 5-213
Cow position: chr18:41950380-41950146 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 9

Conread position: 7-122
Cow position: chr18:51398169-51398283 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 7-209
Cow position: chr18:20126458-20126248 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 139

Conread position: 12-212
Cow position: chr18:18592625-18592411 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 12-212
Cow position: chr18:47183152-47183355 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 20

Conread position: 12-215
Cow position: chr18:22180620-22180846 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 112, 68

Conread position: 12-217
Cow position: chr18:38806728-38806519 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 79, 51

Conread position: 13-122
Cow position: chr18:18520641-18520751 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 13-215
Cow position: chr18:33300045-33299840 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 22

Conread position: 19-131
Cow position: chr18:44548592-44548705 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 19-131
Cow position: chr18:45903742-45903856 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 19-217
Cow position: chr18:31711423-31711631 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 20-217
Cow position: chr18:2146439-2146646 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 62, 50

Conread position: 23-215
Cow position: chr18:11685107-11684917 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 18

Conread position: 127-207
Cow position: chr18:23505354-23505274 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 73
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 127-217
Cow position: chr18:49038485-49038395 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.