Cow genome map
| Conread name: | Tra1-TCH01D090010 |
| Conread position: | 1-122 |
| Cow position: | chr20:7737987-7738105 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-131 |
| Cow position: | chr20:18379624-18379495 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-131 |
| Cow position: | chr20:23506186-23506052 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-216 |
| Cow position: | chr20:25351179-25351394 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 98, 117 |
| Conread position: | 3-110 |
| Cow position: | chr20:3606661-3606765 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-121 |
| Cow position: | chr20:14980262-14980378 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-121 |
| Cow position: | chr20:16977592-16977717 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 3-122 |
| Cow position: | chr20:28605452-28605335 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 3-123 |
| Cow position: | chr20:1999630-1999510 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-127 |
| Cow position: | chr20:14807129-14807008 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 3-131 |
| Cow position: | chr20:38061527-38061649 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 3-132 |
| Cow position: | chr20:2069885-2070016 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 3-177 |
| Cow position: | chr20:27407650-27407838 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 121, 11 |
| Conread position: | 3-213 |
| Cow position: | chr20:14572131-14572352 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 3-216 |
| Cow position: | chr20:12581710-12581944 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 3-217 |
| Cow position: | chr20:2298547-2298777 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 3-229 |
| Cow position: | chr20:26077447-26077672 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 4-129 |
| Cow position: | chr20:4931323-4931199 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-217 |
| Cow position: | chr20:4786790-4787001 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 9-127 |
| Cow position: | chr20:3148921-3148805 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 12-122 |
| Cow position: | chr20:24491790-24491897 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 12-212 |
| Cow position: | chr20:21204570-21204372 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 12-213 |
| Cow position: | chr20:10788676-10788877 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 105, 92 |
| Conread position: | 12-216 |
| Cow position: | chr20:7658988-7659207 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 12-216 |
| Cow position: | chr20:32083862-32084069 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 98, 138 |
| Conread position: | 12-217 |
| Cow position: | chr20:4891881-4892096 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 12-217 |
| Cow position: | chr20:25009396-25009624 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 201 |
| Conread position: | 12-217 |
| Cow position: | chr20:28441556-28441336 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 12-223 |
| Cow position: | chr20:8308241-8308023 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 13-210 |
| Cow position: | chr20:34397198-34397399 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-223 |
| Cow position: | chr20:23103428-23103226 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 160, 68 |
| Conread position: | 19-131 |
| Cow position: | chr20:7425968-7426080 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 19-219 |
| Cow position: | chr20:18423905-18423707 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 43-218 |
| Cow position: | chr20:3351082-3350909 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 115-211 |
| Cow position: | chr20:8817381-8817476 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 116-214 |
| Cow position: | chr20:3606852-3606948 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 122-216 |
| Cow position: | chr20:31740115-31740209 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-217 |
| Cow position: | chr20:1009607-1009697 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.