Cow genome map

Conread name: Tra1-TCH01D090010

Conread position: 1-211
Cow position: chr23:40081705-40081488 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 10

Conread position: 3-121
Cow position: chr23:41478082-41477965 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 3-127
Cow position: chr23:1510722-1510846 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-127
Cow position: chr23:17597627-17597507 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-131
Cow position: chr23:534432-534304 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr23:1429627-1429749 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 84, 0

Conread position: 3-131
Cow position: chr23:2511351-2511222 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 89

Conread position: 3-131
Cow position: chr23:23104285-23104411 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 3-137
Cow position: chr23:9131759-9131890 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 0

Conread position: 3-138
Cow position: chr23:20725485-20725618 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 3-139
Cow position: chr23:23034234-23034370 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr23:7155496-7155690 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 11

Conread position: 3-217
Cow position: chr23:21765104-21764889 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 166, 113

Conread position: 3-218
Cow position: chr23:1438483-1438259 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 11

Conread position: 3-251
Cow position: chr23:16880964-16881228 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 72, 253

Conread position: 4-115
Cow position: chr23:3214476-3214588 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 7, 0

Conread position: 4-121
Cow position: chr23:15056371-15056485 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 4-194
Cow position: chr23:5395279-5395484 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 15

Conread position: 5-125
Cow position: chr23:24689491-24689369 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 5-146
Cow position: chr23:5603543-5603686 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 73

Conread position: 5-210
Cow position: chr23:15286948-15287162 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 11

Conread position: 5-211
Cow position: chr23:6147850-6148060 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 9

Conread position: 5-216
Cow position: chr23:27528908-27529114 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 57

Conread position: 6-217
Cow position: chr23:5732739-5732518 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 9

Conread position: 7-122
Cow position: chr23:16664202-16664316 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 7-216
Cow position: chr23:23904145-23904358 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 7

Conread position: 12-130
Cow position: chr23:12363422-12363540 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 12-131
Cow position: chr23:24718606-24718725 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-213
Cow position: chr23:20615151-20615354 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 100, 46

Conread position: 12-214
Cow position: chr23:5237242-5237456 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 23

Conread position: 12-215
Cow position: chr23:16961483-16961268 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 12-216
Cow position: chr23:8063725-8063514 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 64

Conread position: 12-223
Cow position: chr23:18748879-18749101 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 13-127
Cow position: chr23:18204600-18204487 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 19-209
Cow position: chr23:6150005-6150197 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 63

Conread position: 19-218
Cow position: chr23:13202181-13202390 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 35

Conread position: 24-217
Cow position: chr23:35938514-35938314 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 14

Conread position: 27-217
Cow position: chr23:1403641-1403836 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 73, 53

Conread position: 31-211
Cow position: chr23:33696031-33696222 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 151

Conread position: 43-251
Cow position: chr23:6367763-6367541 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 41

Conread position: 92-218
Cow position: chr23:11314943-11315067 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 122-217
Cow position: chr23:24966399-24966494 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 127-217
Cow position: chr23:2799639-2799549 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 127-219
Cow position: chr23:29459040-29459132 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.