Cow genome map

Conread name: Tra1-TCH01D090010

Conread position: 1-131
Cow position: chr7:9077562-9077694 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 13

Conread position: 1-223
Cow position: chr7:6058352-6058128 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 13

Conread position: 1-241
Cow position: chr7:53785741-53785997 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 21

Conread position: 2-127
Cow position: chr7:11784801-11784924 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 2-217
Cow position: chr7:18544146-18544373 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 126, 9

Conread position: 3-122
Cow position: chr7:10392-10274 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 3-122
Cow position: chr7:6043893-6044011 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 3-122
Cow position: chr7:49105958-49106076 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 3-130
Cow position: chr7:39988978-39988851 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr7:12494877-12495004 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 11

Conread position: 3-131
Cow position: chr7:36996602-36996478 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-137
Cow position: chr7:35088904-35088767 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 82, 11

Conread position: 3-138
Cow position: chr7:12918338-12918471 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-205
Cow position: chr7:37362096-37361900 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 119, 16

Conread position: 3-211
Cow position: chr7:40322852-40322642 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 129, 11

Conread position: 3-215
Cow position: chr7:23251340-23251552 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 11

Conread position: 3-216
Cow position: chr7:12488668-12488442 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 71, 12

Conread position: 3-216
Cow position: chr7:13133483-13133689 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 38

Conread position: 3-217
Cow position: chr7:11796659-11796894 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 11

Conread position: 3-217
Cow position: chr7:40263428-40263645 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 11

Conread position: 3-223
Cow position: chr7:29009857-29010073 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 36

Conread position: 3-223
Cow position: chr7:40567301-40567069 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 80

Conread position: 3-260
Cow position: chr7:24168734-24168481 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 126

Conread position: 4-122
Cow position: chr7:34098844-34098726 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 10

Conread position: 4-131
Cow position: chr7:10438571-10438444 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-218
Cow position: chr7:37394543-37394316 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 5-131
Cow position: chr7:23819135-23819011 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-195
Cow position: chr7:29474900-29474700 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 174

Conread position: 9-213
Cow position: chr7:56838284-56838494 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 10-182
Cow position: chr7:1763655-1763488 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 123, 9

Conread position: 11-211
Cow position: chr7:61699470-61699680 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 46

Conread position: 11-214
Cow position: chr7:4765076-4764857 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 78, 193

Conread position: 12-127
Cow position: chr7:8658750-8658635 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-131
Cow position: chr7:15570273-15570154 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-131
Cow position: chr7:17750605-17750726 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 12-212
Cow position: chr7:31170723-31170935 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 114, 69

Conread position: 12-214
Cow position: chr7:18464259-18464473 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 12-215
Cow position: chr7:26631598-26631803 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 63

Conread position: 12-218
Cow position: chr7:29300541-29300760 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 69, 7

Conread position: 12-251
Cow position: chr7:51644877-51644624 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 13-130
Cow position: chr7:19329074-19329191 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-214
Cow position: chr7:29510169-29509955 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 18-131
Cow position: chr7:14317169-14317058 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 20-131
Cow position: chr7:32259970-32260079 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 23-217
Cow position: chr7:11714217-11714417 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 64

Conread position: 23-217
Cow position: chr7:22793560-22793353 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 195

Conread position: 23-217
Cow position: chr7:31497927-31497731 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 32

Conread position: 23-223
Cow position: chr7:12342768-12342970 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 187

Conread position: 24-218
Cow position: chr7:48667627-48667422 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 137

Conread position: 24-218
Cow position: chr7:59168475-59168272 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 37

Conread position: 63-196
Cow position: chr7:5885327-5885192 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 60

Conread position: 73-211
Cow position: chr7:56886350-56886495 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 17

Conread position: 127-212
Cow position: chr7:28544275-28544190 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.