Cow genome map

Conread name: Tra1-TCH01D090010

Conread position: 1-218
Cow position: chr9:48016815-48017045 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 10

Conread position: 2-224
Cow position: chr9:50607105-50606878 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 82

Conread position: 3-121
Cow position: chr9:28726903-28726785 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr9:9596124-9596006 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 77

Conread position: 3-127
Cow position: chr9:4341329-4341208 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 3-130
Cow position: chr9:59897423-59897547 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 3-131
Cow position: chr9:24079131-24079257 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 3-131
Cow position: chr9:32052103-32052231 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 11

Conread position: 3-131
Cow position: chr9:33584857-33584730 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 3-131
Cow position: chr9:34024526-34024654 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 11

Conread position: 3-131
Cow position: chr9:37198953-37199082 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 92

Conread position: 3-209
Cow position: chr9:1894190-1893989 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 11

Conread position: 3-213
Cow position: chr9:26345135-26344910 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 11

Conread position: 3-215
Cow position: chr9:1916135-1916348 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 17

Conread position: 3-216
Cow position: chr9:5441837-5442051 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 123, 45

Conread position: 3-217
Cow position: chr9:13460581-13460358 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 16

Conread position: 3-218
Cow position: chr9:41785048-41785274 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 11

Conread position: 3-224
Cow position: chr9:9516921-9516695 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 130, 16

Conread position: 4-121
Cow position: chr9:40984332-40984450 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 10

Conread position: 4-153
Cow position: chr9:53323960-53323805 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 4-215
Cow position: chr9:20090887-20091108 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 97, 34

Conread position: 4-216
Cow position: chr9:25556811-25557034 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 100, 10

Conread position: 4-217
Cow position: chr9:52828509-52828720 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 118, 34

Conread position: 5-131
Cow position: chr9:9459818-9459939 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 14

Conread position: 5-131
Cow position: chr9:11098623-11098497 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 78

Conread position: 5-217
Cow position: chr9:28772970-28773183 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 9

Conread position: 5-218
Cow position: chr9:38289466-38289262 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 7-131
Cow position: chr9:60395218-60395093 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 7

Conread position: 9-131
Cow position: chr9:43159587-43159707 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 9-194
Cow position: chr9:34034102-34034295 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 147

Conread position: 10-111
Cow position: chr9:34707477-34707376 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-131
Cow position: chr9:26394512-26394394 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-137
Cow position: chr9:28747682-28747559 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 18-131
Cow position: chr9:52998537-52998424 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 18

Conread position: 19-214
Cow position: chr9:41486372-41486183 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.