Cow genome map
| Conread name: | Tra1-TCH01D110036 |
| Conread position: | 287-650 |
| Cow position: | chr10:25639019-25639357 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 205 |
| Conread position: | 297-746 |
| Cow position: | chr10:27773748-27774183 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 300-648 |
| Cow position: | chr10:6228938-6229269 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 301-556 |
| Cow position: | chr10:46749524-46749267 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 301-650 |
| Cow position: | chr10:53108326-53108653 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 307-731 |
| Cow position: | chr10:4541770-4542175 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 308-549 |
| Cow position: | chr10:14425316-14425557 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 310-467 |
| Cow position: | chr10:15438626-15438783 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 39 |
| Conread position: | 313-534 |
| Cow position: | chr10:30427791-30428004 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 313-544 |
| Cow position: | chr10:18044249-18044021 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 313-549 |
| Cow position: | chr10:21669013-21669247 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 313-549 |
| Cow position: | chr10:33715852-33716074 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 313-549 |
| Cow position: | chr10:53976528-53976763 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 313-556 |
| Cow position: | chr10:14643488-14643722 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 237, 36 |
| Conread position: | 313-648 |
| Cow position: | chr10:6603771-6603458 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 277, 42 |
| Conread position: | 313-694 |
| Cow position: | chr10:52426130-52426506 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 112 |
| Conread position: | 313-789 |
| Cow position: | chr10:57426310-57426774 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 313-790 |
| Cow position: | chr10:13339442-13339906 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 341, 85 |
| Conread position: | 313-790 |
| Cow position: | chr10:33154998-33155462 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 238 |
| Conread position: | 313-790 |
| Cow position: | chr10:44316488-44316982 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 48 |
| Conread position: | 314-549 |
| Cow position: | chr10:32746544-32746777 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 314-549 |
| Cow position: | chr10:53484707-53484940 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 314-556 |
| Cow position: | chr10:19974541-19974306 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 104, 121 |
| Conread position: | 314-647 |
| Cow position: | chr10:33481654-33481345 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 314-647 |
| Cow position: | chr10:33845583-33845895 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 314-648 |
| Cow position: | chr10:19972172-19972484 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 171, 32 |
| Conread position: | 314-650 |
| Cow position: | chr10:52671073-52671391 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 188, 195 |
| Conread position: | 314-733 |
| Cow position: | chr10:52418914-52419324 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 248 |
| Conread position: | 314-788 |
| Cow position: | chr10:36757817-36758277 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 24 |
| Conread position: | 314-790 |
| Cow position: | chr10:15173242-15172780 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 24 |
| Conread position: | 314-790 |
| Cow position: | chr10:32880654-32881119 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 237 |
| Conread position: | 314-790 |
| Cow position: | chr10:66618152-66618615 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 62 |
| Conread position: | 317-549 |
| Cow position: | chr10:15394956-15395188 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 317-549 |
| Cow position: | chr10:34165235-34165467 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-549 |
| Cow position: | chr10:50577261-50577494 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 317-683 |
| Cow position: | chr10:28227931-28228291 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 32 |
| Conread position: | 317-789 |
| Cow position: | chr10:68822404-68821949 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 322 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 95, 177 |
| Conread position: | 319-737 |
| Cow position: | chr10:27376110-27375694 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 246 |
| Conread position: | 320-545 |
| Cow position: | chr10:69233976-69234194 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 325-790 |
| Cow position: | chr10:55346570-55346124 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 340-691 |
| Cow position: | chr10:10110288-10110634 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 210, 61 |
| Conread position: | 343-548 |
| Cow position: | chr10:69647131-69646929 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 352-557 |
| Cow position: | chr10:17857204-17857005 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 198, 35 |
| Conread position: | 352-790 |
| Cow position: | chr10:25943597-25944023 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 302, 199 |
| Conread position: | 394-790 |
| Cow position: | chr10:59336387-59336776 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 251, 73 |
Show alignments to all cow chromosomes.