Cow genome map


           Conread name:
           Tra1-TCH01D110036
        

               Conread position:
               287-650
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 205
               

               Conread position:
               297-746
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               300-648
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               301-556
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               301-650
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               307-731
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               46, 114
               

               Conread position:
               308-549
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-467
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 39
               

               Conread position:
               313-534
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               313-544
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 0
               

               Conread position:
               313-556
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               237, 36
               

               Conread position:
               313-648
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               277, 42
               

               Conread position:
               313-694
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 112
               

               Conread position:
               313-789
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               320
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               341, 85
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 238
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 48
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               314-556
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               104, 121
               

               Conread position:
               314-647
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               314-647
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               314-648
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               171, 32
               

               Conread position:
               314-650
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               188, 195
               

               Conread position:
               314-733
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 248
               

               Conread position:
               314-788
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 24
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 24
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 237
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 62
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               96, 41
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               317-683
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 32
               

               Conread position:
               317-789
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               322
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               95, 177
               

               Conread position:
               319-737
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 246
               

               Conread position:
               320-545
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               6, 67
               

               Conread position:
               325-790
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               98, 14
               

               Conread position:
               340-691
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               210, 61
               

               Conread position:
               343-548
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               352-557
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               198, 35
               

               Conread position:
               352-790
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               302, 199
               

               Conread position:
               394-790
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               251, 73
               
Show alignments to all cow chromosomes.