Cow genome map
| Conread name: | Tra1-TCH01D110036 |
| Conread position: | 272-790 |
| Cow position: | chr12:27775812-27776315 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 299-647 |
| Cow position: | chr12:5950059-5949704 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 303-549 |
| Cow position: | chr12:37430369-37430613 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 308-790 |
| Cow position: | chr12:39550017-39550487 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 22 |
| Conread position: | 310-549 |
| Cow position: | chr12:39557134-39557373 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-549 |
| Cow position: | chr12:41812746-41812510 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 313-509 |
| Cow position: | chr12:26553522-26553718 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-731 |
| Cow position: | chr12:1021868-1022274 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 313-790 |
| Cow position: | chr12:40057630-40057168 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 314 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 341, 25 |
| Conread position: | 314-478 |
| Cow position: | chr12:2261322-2261158 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-548 |
| Cow position: | chr12:43567234-43567000 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr12:5938490-5938724 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 314-549 |
| Cow position: | chr12:24690624-24690857 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 18, 195 |
| Conread position: | 314-549 |
| Cow position: | chr12:27845340-27845575 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr12:32100876-32101109 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 109, 78 |
| Conread position: | 314-549 |
| Cow position: | chr12:40313967-40313738 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 314-647 |
| Cow position: | chr12:28825834-28826148 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 314-650 |
| Cow position: | chr12:6310053-6309732 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 171, 104 |
| Conread position: | 314-790 |
| Cow position: | chr12:24102256-24101792 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 237 |
| Conread position: | 314-790 |
| Cow position: | chr12:46704595-46704132 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 340, 194 |
| Conread position: | 317-453 |
| Cow position: | chr12:15180049-15179913 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-648 |
| Cow position: | chr12:29002502-29002193 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 326-790 |
| Cow position: | chr12:7663652-7664144 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 301 |
| Conread position: | 329-734 |
| Cow position: | chr12:42838755-42838365 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 325, 142 |
| Conread position: | 355-553 |
| Cow position: | chr12:42071036-42070837 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 355-651 |
| Cow position: | chr12:37403965-37404242 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 96, 79 |
| Conread position: | 401-625 |
| Cow position: | chr12:27666612-27666387 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 163, 33 |
| Conread position: | 479-648 |
| Cow position: | chr12:35466730-35466897 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 85 |
Show alignments to all cow chromosomes.