Cow genome map
| Conread name: | Tra1-TCH01D110036 |
| Conread position: | 300-790 |
| Cow position: | chr14:2271762-2272241 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 100 |
| Conread position: | 300-790 |
| Cow position: | chr14:12334763-12334285 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 13 |
| Conread position: | 303-645 |
| Cow position: | chr14:27731696-27732021 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 243 |
| Conread position: | 305-542 |
| Cow position: | chr14:20670834-20670597 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-646 |
| Cow position: | chr14:15754412-15754753 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 107 |
| Conread position: | 306-790 |
| Cow position: | chr14:35326477-35326948 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 49 |
| Conread position: | 310-731 |
| Cow position: | chr14:31352707-31352298 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 41 |
| Conread position: | 311-734 |
| Cow position: | chr14:37835840-37836242 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 343, 125 |
| Conread position: | 313-537 |
| Cow position: | chr14:43839673-43839454 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 313-540 |
| Cow position: | chr14:46395817-46396040 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 99, 105 |
| Conread position: | 313-548 |
| Cow position: | chr14:11143241-11143006 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-549 |
| Cow position: | chr14:12356781-12357017 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-549 |
| Cow position: | chr14:34389426-34389653 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 313-731 |
| Cow position: | chr14:48579595-48579193 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 337, 84 |
| Conread position: | 314-548 |
| Cow position: | chr14:36456439-36456209 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 83, 171 |
| Conread position: | 314-549 |
| Cow position: | chr14:2335868-2336104 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 314-549 |
| Cow position: | chr14:20735620-20735848 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 314-549 |
| Cow position: | chr14:21315621-21315842 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 314-549 |
| Cow position: | chr14:23934867-23935102 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr14:38884844-38885080 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 314-552 |
| Cow position: | chr14:8808437-8808199 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-553 |
| Cow position: | chr14:36601791-36602026 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 314-647 |
| Cow position: | chr14:26865020-26865330 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 314-648 |
| Cow position: | chr14:27964890-27965199 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 314-787 |
| Cow position: | chr14:22649758-22650218 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 314-789 |
| Cow position: | chr14:40069601-40070053 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 116 |
| Conread position: | 317-554 |
| Cow position: | chr14:49754271-49754036 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 322-549 |
| Cow position: | chr14:24208136-24208362 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 322-649 |
| Cow position: | chr14:27936906-27937226 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 203, 110 |
| Conread position: | 326-790 |
| Cow position: | chr14:3557948-3558406 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 327-790 |
| Cow position: | chr14:21346948-21347394 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 309 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 326, 224 |
| Conread position: | 328-549 |
| Cow position: | chr14:43170313-43170534 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-788 |
| Cow position: | chr14:47194439-47193993 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 298 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 103, 166 |
| Conread position: | 340-790 |
| Cow position: | chr14:40150637-40150200 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 314, 102 |
| Conread position: | 387-646 |
| Cow position: | chr14:3512519-3512278 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 202, 155 |
| Conread position: | 401-647 |
| Cow position: | chr14:29173031-29172785 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 120, 33 |
Show alignments to all cow chromosomes.