Cow genome map


           Conread name:
           Tra1-TCH01D110036
        

               Conread position:
               292-557
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               302-789
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 249
               

               Conread position:
               305-790
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 74
               

               Conread position:
               308-509
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               48, 42
               

               Conread position:
               309-785
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               316
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               384, 166
               

               Conread position:
               310-549
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-549
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-790
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 89
               

               Conread position:
               310-790
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               346, 123
               

               Conread position:
               312-553
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               313-548
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-643
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               313-647
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               313-690
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               276, 143
               

               Conread position:
               313-690
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 238
               

               Conread position:
               314-545
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               314-546
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-547
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-548
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               146, 92
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-558
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               314-558
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               82, 128
               

               Conread position:
               314-561
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               236, 44
               

               Conread position:
               314-643
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 0
               

               Conread position:
               314-648
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 44
               

               Conread position:
               314-689
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               314-690
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               119, 46
               

               Conread position:
               314-734
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               329, 184
               

               Conread position:
               314-743
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 237
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               307
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               344, 62
               

               Conread position:
               317-547
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               317-554
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               317-558
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               233, 114
               

               Conread position:
               317-648
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               317-790
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 232
               

               Conread position:
               317-790
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               316
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               196, 107
               

               Conread position:
               319-544
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-790
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 232
               

               Conread position:
               321-694
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 132
               

               Conread position:
               322-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               16, 119
               

               Conread position:
               323-549
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               323-556
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               325-743
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 65
               

               Conread position:
               352-790
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               314
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               212, 45
               

               Conread position:
               366-643
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               368-544
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               399-790
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               249, 152
               

               Conread position:
               404-549
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               439-688
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 116
               
Show alignments to all cow chromosomes.