Cow genome map
Conread name: | Tra1-TCH01D110036 |
Conread position: | 295-790 |
Cow position: | chr17:38868809-38868325 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 327 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 361, 255 |
Conread position: | 296-644 |
Cow position: | chr17:35885038-35884707 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 19 |
Conread position: | 299-790 |
Cow position: | chr17:1915828-1916311 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 353, 16 |
Conread position: | 301-647 |
Cow position: | chr17:38599316-38598979 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 239 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 26, 12 |
Conread position: | 303-548 |
Cow position: | chr17:40682378-40682623 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 310-468 |
Cow position: | chr17:17271142-17270984 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 310-488 |
Cow position: | chr17:1659012-1659190 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 137 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 310-549 |
Cow position: | chr17:6369341-6369103 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 174 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 313-548 |
Cow position: | chr17:24583816-24583587 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 166 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 313-549 |
Cow position: | chr17:7837136-7837366 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 176 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 195, 0 |
Conread position: | 313-549 |
Cow position: | chr17:17776275-17776039 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 313-549 |
Cow position: | chr17:21618985-21619221 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 313-549 |
Cow position: | chr17:34958280-34958039 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 182 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 121, 16 |
Conread position: | 313-549 |
Cow position: | chr17:36655580-36655352 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 176 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 313-648 |
Cow position: | chr17:19125833-19126150 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 238 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 238, 0 |
Conread position: | 313-740 |
Cow position: | chr17:6528431-6528016 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 339, 238 |
Conread position: | 313-785 |
Cow position: | chr17:3353782-3353321 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 313 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 343, 238 |
Conread position: | 313-790 |
Cow position: | chr17:21649531-21649064 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 236 |
Conread position: | 313-790 |
Cow position: | chr17:28815307-28815771 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 343, 237 |
Conread position: | 314-493 |
Cow position: | chr17:10198527-10198706 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 133 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-543 |
Cow position: | chr17:23804470-23804240 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 170 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 314-543 |
Cow position: | chr17:24989602-24989374 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 314-548 |
Cow position: | chr17:28810030-28810262 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 170 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 314-549 |
Cow position: | chr17:1193072-1192838 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 170 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 169, 0 |
Conread position: | 314-549 |
Cow position: | chr17:5774295-5774527 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 314-549 |
Cow position: | chr17:23459857-23460092 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 171 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr17:23829867-23829632 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 173 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr17:36071414-36071649 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 169 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr17:37352706-37352937 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 178 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 39, 117 |
Conread position: | 314-644 |
Cow position: | chr17:13267297-13266989 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 314-646 |
Cow position: | chr17:3967223-3966894 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 20 |
Conread position: | 314-647 |
Cow position: | chr17:1034250-1033919 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 99 |
Conread position: | 314-690 |
Cow position: | chr17:27786359-27785998 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 233 |
Conread position: | 314-784 |
Cow position: | chr17:21568307-21567822 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 16 |
Conread position: | 314-790 |
Cow position: | chr17:12960070-12959606 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 237 |
Conread position: | 314-790 |
Cow position: | chr17:24860732-24861187 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 322 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 22, 122 |
Conread position: | 314-790 |
Cow position: | chr17:40870671-40870222 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 321 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 36, 43 |
Conread position: | 315-693 |
Cow position: | chr17:2466596-2466958 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 247 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 337, 186 |
Conread position: | 317-491 |
Cow position: | chr17:4874103-4874277 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 133 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 317-549 |
Cow position: | chr17:590001-590229 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 162 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 317-553 |
Cow position: | chr17:13633645-13633879 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 166 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 318-648 |
Cow position: | chr17:18462118-18462433 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 229 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 130, 78 |
Conread position: | 321-556 |
Cow position: | chr17:25148574-25148810 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 171 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 229, 0 |
Conread position: | 352-540 |
Cow position: | chr17:4555408-4555220 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 61, 66 |
Conread position: | 352-734 |
Cow position: | chr17:6102781-6102403 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 199 |
Conread position: | 356-790 |
Cow position: | chr17:21383212-21383633 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 294 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 298, 10 |
Conread position: | 387-648 |
Cow position: | chr17:8299160-8298908 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 195 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 202, 129 |
Show alignments to all cow chromosomes.