Cow genome map


           Conread name:
           Tra1-TCH01D110036
        

               Conread position:
               295-790
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               327
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               361, 255
               

               Conread position:
               296-644
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               299-790
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 16
               

               Conread position:
               301-647
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               303-548
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-468
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-488
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-549
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               313-548
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               121, 16
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               313-648
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               238, 0
               

               Conread position:
               313-740
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 238
               

               Conread position:
               313-785
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               313
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               343, 238
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 236
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               343, 237
               

               Conread position:
               314-493
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-543
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               314-543
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               314-548
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               39, 117
               

               Conread position:
               314-644
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               314-646
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 20
               

               Conread position:
               314-647
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 99
               

               Conread position:
               314-690
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 233
               

               Conread position:
               314-784
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 16
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 237
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 122
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               321
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               315-693
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               337, 186
               

               Conread position:
               317-491
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               317-553
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               318-648
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               130, 78
               

               Conread position:
               321-556
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               229, 0
               

               Conread position:
               352-540
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 66
               

               Conread position:
               352-734
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 199
               

               Conread position:
               356-790
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               294
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               298, 10
               

               Conread position:
               387-648
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               202, 129
               
Show alignments to all cow chromosomes.