Cow genome map


           Conread name:
           Tra1-TCH01D110036
        

               Conread position:
               264-549
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               297-554
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               301-549
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               301-553
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               304-561
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               304-790
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 143
               

               Conread position:
               305-549
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               307-648
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               308-549
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               308-647
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 0
               

               Conread position:
               308-790
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 175
               

               Conread position:
               308-790
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 156
               

               Conread position:
               310-549
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-790
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 45
               

               Conread position:
               310-790
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               321
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               23, 90
               

               Conread position:
               311-521
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               313-548
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               313-644
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 233
               

               Conread position:
               314-443
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               105, 225
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               314-644
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               105, 161
               

               Conread position:
               314-648
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               314-648
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               314-694
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 108
               

               Conread position:
               314-730
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 122
               

               Conread position:
               314-743
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               325, 69
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 236
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 76
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               325
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 233
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 110
               

               Conread position:
               316-548
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               317-493
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               317-547
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               317-556
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               231, 0
               

               Conread position:
               342-790
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               293
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               207, 87
               

               Conread position:
               344-648
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               141, 123
               

               Conread position:
               348-646
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               211, 104
               

               Conread position:
               352-549
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               352-647
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               352-788
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 198
               

               Conread position:
               355-549
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               355-549
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-790
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 29
               
Show alignments to all cow chromosomes.