Cow genome map
Conread name: | Tra1-TCH01D110036 |
Conread position: | 264-549 |
Cow position: | chr19:34066385-34066100 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 67 |
Conread position: | 297-554 |
Cow position: | chr19:35641281-35641025 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 301-549 |
Cow position: | chr19:3930392-3930154 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 180 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 301-553 |
Cow position: | chr19:42246038-42246287 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 178 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 304-561 |
Cow position: | chr19:50550541-50550285 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 184 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 96, 18 |
Conread position: | 304-790 |
Cow position: | chr19:28945064-28944597 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 143 |
Conread position: | 305-549 |
Cow position: | chr19:33257671-33257915 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 307-648 |
Cow position: | chr19:35616568-35616250 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 235 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 182, 0 |
Conread position: | 308-549 |
Cow position: | chr19:14480140-14480379 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 180 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 308-647 |
Cow position: | chr19:47874789-47874468 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 0 |
Conread position: | 308-790 |
Cow position: | chr19:28608917-28608448 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 175 |
Conread position: | 308-790 |
Cow position: | chr19:38055186-38055656 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 344, 156 |
Conread position: | 310-549 |
Cow position: | chr19:13227500-13227739 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 310-790 |
Cow position: | chr19:28469164-28469632 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 342, 45 |
Conread position: | 310-790 |
Cow position: | chr19:30242594-30242126 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 321 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 23, 90 |
Conread position: | 311-521 |
Cow position: | chr19:37277176-37276968 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 156 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 313-548 |
Cow position: | chr19:28446655-28446423 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 171 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 313-549 |
Cow position: | chr19:19008243-19008005 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 178 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 19, 89 |
Conread position: | 313-549 |
Cow position: | chr19:50658042-50657808 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 313-644 |
Cow position: | chr19:6476713-6477013 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 228 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 158, 0 |
Conread position: | 313-790 |
Cow position: | chr19:30251595-30251131 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 317 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 40, 86 |
Conread position: | 313-790 |
Cow position: | chr19:45585386-45585845 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 339, 233 |
Conread position: | 314-443 |
Cow position: | chr19:7647784-7647913 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 98 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr19:6471771-6472007 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 165 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 105, 225 |
Conread position: | 314-549 |
Cow position: | chr19:8550961-8551196 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr19:14380377-14380142 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr19:27823674-27823908 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 314-644 |
Cow position: | chr19:7715128-7714792 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 233 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 105, 161 |
Conread position: | 314-648 |
Cow position: | chr19:2939378-2939681 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 234 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 314-648 |
Cow position: | chr19:39753585-39753270 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 314-694 |
Cow position: | chr19:21125652-21125281 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 108 |
Conread position: | 314-730 |
Cow position: | chr19:52332425-52332838 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 122 |
Conread position: | 314-743 |
Cow position: | chr19:27828292-27828708 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 291 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 325, 69 |
Conread position: | 314-790 |
Cow position: | chr19:7700349-7700817 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 16 |
Conread position: | 314-790 |
Cow position: | chr19:11111761-11112215 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 236 |
Conread position: | 314-790 |
Cow position: | chr19:11209675-11210141 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 26 |
Conread position: | 314-790 |
Cow position: | chr19:28436889-28437353 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 122 |
Conread position: | 314-790 |
Cow position: | chr19:43435185-43434722 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 76 |
Conread position: | 314-790 |
Cow position: | chr19:43751084-43750625 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 325 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 26, 233 |
Conread position: | 314-790 |
Cow position: | chr19:50677448-50677912 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 110 |
Conread position: | 316-548 |
Cow position: | chr19:53640314-53640088 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 168 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 317-493 |
Cow position: | chr19:30263425-30263601 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 134 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 83, 21 |
Conread position: | 317-547 |
Cow position: | chr19:11241578-11241348 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 171 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 317-549 |
Cow position: | chr19:6486067-6485846 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 164 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 30, 21 |
Conread position: | 317-556 |
Cow position: | chr19:42155897-42155657 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 175 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 231, 0 |
Conread position: | 342-790 |
Cow position: | chr19:53533806-53533365 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 293 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 207, 87 |
Conread position: | 344-648 |
Cow position: | chr19:2011768-2011472 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 219 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 141, 123 |
Conread position: | 348-646 |
Cow position: | chr19:8824202-8823907 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 215 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 211, 104 |
Conread position: | 352-549 |
Cow position: | chr19:33082158-33082355 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 352-647 |
Cow position: | chr19:24985879-24986169 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 62 |
Conread position: | 352-788 |
Cow position: | chr19:11978680-11979106 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 298, 198 |
Conread position: | 355-549 |
Cow position: | chr19:12053751-12053557 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 153 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 355-549 |
Cow position: | chr19:12066841-12067035 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 152 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 565-790 |
Cow position: | chr19:3930157-3929925 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 159 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 42, 29 |
Show alignments to all cow chromosomes.