Cow genome map
| Conread name: | Tra1-TCH01D110036 |
| Conread position: | 279-556 |
| Cow position: | chr20:24420276-24420000 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 298-790 |
| Cow position: | chr20:793618-793137 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 264 |
| Conread position: | 302-646 |
| Cow position: | chr20:2228283-2228606 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 303-731 |
| Cow position: | chr20:2248402-2248815 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 349, 34 |
| Conread position: | 310-473 |
| Cow position: | chr20:34834273-34834110 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-549 |
| Cow position: | chr20:14050896-14051131 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 313-549 |
| Cow position: | chr20:14801428-14801664 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 313-561 |
| Cow position: | chr20:30109309-30109058 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 141, 107 |
| Conread position: | 313-731 |
| Cow position: | chr20:20141989-20142390 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 288 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 313-790 |
| Cow position: | chr20:26977828-26977362 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 238 |
| Conread position: | 314-549 |
| Cow position: | chr20:2306664-2306899 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr20:17534167-17534402 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr20:30543973-30544210 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 314-550 |
| Cow position: | chr20:17527194-17527430 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-553 |
| Cow position: | chr20:39657083-39656846 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 314-556 |
| Cow position: | chr20:19249913-19250153 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 314-790 |
| Cow position: | chr20:3546217-3546682 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 211 |
| Conread position: | 314-790 |
| Cow position: | chr20:5765946-5765482 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 24 |
| Conread position: | 314-790 |
| Cow position: | chr20:20143676-20143211 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 255 |
| Conread position: | 314-790 |
| Cow position: | chr20:34102794-34102332 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 316 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 344, 121 |
| Conread position: | 317-548 |
| Cow position: | chr20:5301529-5301758 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 317-553 |
| Cow position: | chr20:27730811-27730587 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 318-556 |
| Cow position: | chr20:2095893-2095656 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 318-644 |
| Cow position: | chr20:6880450-6880139 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 121, 235 |
| Conread position: | 319-790 |
| Cow position: | chr20:3493992-3494451 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 36 |
| Conread position: | 320-549 |
| Cow position: | chr20:36964096-36963867 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 340-644 |
| Cow position: | chr20:3542131-3542416 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 355-549 |
| Cow position: | chr20:26462900-26463094 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 19, 142 |
| Conread position: | 383-549 |
| Cow position: | chr20:4237628-4237468 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 387-731 |
| Cow position: | chr20:16608915-16609244 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 267, 83 |
| Conread position: | 424-553 |
| Cow position: | chr20:37207555-37207427 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.