Cow genome map
| Conread name: | Tra1-TCH01D110036 |
| Conread position: | 309-648 |
| Cow position: | chr21:36215338-36215653 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 133, 6 |
| Conread position: | 310-790 |
| Cow position: | chr21:47956801-47956332 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 240, 45 |
| Conread position: | 311-790 |
| Cow position: | chr21:24815947-24816415 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 240 |
| Conread position: | 312-549 |
| Cow position: | chr21:22205069-22205306 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-549 |
| Cow position: | chr21:11730728-11730952 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 313-556 |
| Cow position: | chr21:18599751-18599507 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 313-686 |
| Cow position: | chr21:17928376-17928748 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 279 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 79, 153 |
| Conread position: | 313-790 |
| Cow position: | chr21:40223594-40223129 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 82 |
| Conread position: | 314-525 |
| Cow position: | chr21:12632825-12633034 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 314-547 |
| Cow position: | chr21:26194147-26193914 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 314-549 |
| Cow position: | chr21:14749152-14748917 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr21:31483852-31483617 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr21:32448817-32448582 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-556 |
| Cow position: | chr21:12193921-12193678 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 0 |
| Conread position: | 314-625 |
| Cow position: | chr21:395188-394881 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 29 |
| Conread position: | 314-647 |
| Cow position: | chr21:2944152-2944489 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 155 |
| Conread position: | 314-690 |
| Cow position: | chr21:36011100-36010745 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 314-690 |
| Cow position: | chr21:47964425-47964064 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 340, 227 |
| Conread position: | 314-790 |
| Cow position: | chr21:1268737-1268276 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 332, 65 |
| Conread position: | 314-790 |
| Cow position: | chr21:22117381-22117855 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 317-648 |
| Cow position: | chr21:31768459-31768146 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 317-790 |
| Cow position: | chr21:6392672-6392219 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 323 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 339, 118 |
| Conread position: | 318-556 |
| Cow position: | chr21:3477662-3477423 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 319-648 |
| Cow position: | chr21:7172503-7172195 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 128, 79 |
| Conread position: | 322-528 |
| Cow position: | chr21:32418851-32418645 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-790 |
| Cow position: | chr21:3625433-3624988 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 331, 97 |
| Conread position: | 332-586 |
| Cow position: | chr21:21739235-21738982 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 248, 141 |
| Conread position: | 352-549 |
| Cow position: | chr21:29488091-29487898 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 355-587 |
| Cow position: | chr21:11161266-11161030 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 85, 208 |
| Conread position: | 360-549 |
| Cow position: | chr21:41562623-41562434 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.