Cow genome map
| Conread name: | Tra1-TCH01D110036 |
| Conread position: | 288-560 |
| Cow position: | chr22:4331583-4331309 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 205, 148 |
| Conread position: | 288-614 |
| Cow position: | chr22:35969332-35968994 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 290 |
| Conread position: | 289-556 |
| Cow position: | chr22:5453299-5453033 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 295-482 |
| Cow position: | chr22:14243043-14242859 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 305-556 |
| Cow position: | chr22:4616451-4616198 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 308-549 |
| Cow position: | chr22:18718664-18718905 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 310-790 |
| Cow position: | chr22:10037027-10037496 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 240 |
| Conread position: | 310-790 |
| Cow position: | chr22:15674203-15673737 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 313-549 |
| Cow position: | chr22:20082485-20082251 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 313-549 |
| Cow position: | chr22:27427306-27427542 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 313-650 |
| Cow position: | chr22:3148337-3148657 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 313-768 |
| Cow position: | chr22:26779283-26778833 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 302 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 245, 17 |
| Conread position: | 314-467 |
| Cow position: | chr22:44053459-44053306 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-539 |
| Cow position: | chr22:14230533-14230762 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 8 |
| Conread position: | 314-541 |
| Cow position: | chr22:15698652-15698425 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 314-549 |
| Cow position: | chr22:7804902-7804667 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr22:12229603-12229838 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr22:12449648-12449883 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-549 |
| Cow position: | chr22:29382570-29382335 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-790 |
| Cow position: | chr22:4041016-4041476 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 332, 47 |
| Conread position: | 314-790 |
| Cow position: | chr22:20048699-20048235 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 47 |
| Conread position: | 314-790 |
| Cow position: | chr22:39718848-39718386 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 237 |
| Conread position: | 317-549 |
| Cow position: | chr22:10518561-10518332 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 317-549 |
| Cow position: | chr22:41848374-41848606 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-549 |
| Cow position: | chr22:43894130-43894361 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 317-790 |
| Cow position: | chr22:43703818-43703356 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 234 |
| Conread position: | 318-648 |
| Cow position: | chr22:23412256-23412602 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 219 |
| Conread position: | 318-790 |
| Cow position: | chr22:26720556-26720085 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 176 |
| Conread position: | 322-549 |
| Cow position: | chr22:5454267-5454039 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 335-648 |
| Cow position: | chr22:1684829-1684532 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 78, 208 |
| Conread position: | 337-684 |
| Cow position: | chr22:35952713-35953051 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 12 |
| Conread position: | 487-645 |
| Cow position: | chr22:9548876-9548715 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 489-648 |
| Cow position: | chr22:5711384-5711223 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.