Cow genome map
| Conread name: | Tra1-TCH01D110036 |
| Conread position: | 291-549 |
| Cow position: | chr23:40369062-40369318 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 303-482 |
| Cow position: | chr23:19802144-19801965 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 5, 140 |
| Conread position: | 303-549 |
| Cow position: | chr23:7522212-7522456 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 33, 134 |
| Conread position: | 305-790 |
| Cow position: | chr23:9729472-9728995 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 249 |
| Conread position: | 311-790 |
| Cow position: | chr23:37746472-37746941 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 241 |
| Conread position: | 312-731 |
| Cow position: | chr23:13632447-13632034 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 245 |
| Conread position: | 313-556 |
| Cow position: | chr23:29125106-29125350 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 314-519 |
| Cow position: | chr23:9996651-9996448 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 314-549 |
| Cow position: | chr23:6069812-6070044 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 314-549 |
| Cow position: | chr23:12410189-12409962 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 314-549 |
| Cow position: | chr23:21991726-21991961 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-556 |
| Cow position: | chr23:18273327-18273084 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 138, 143 |
| Conread position: | 314-648 |
| Cow position: | chr23:5299608-5299925 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 144, 115 |
| Conread position: | 314-734 |
| Cow position: | chr23:6215037-6214633 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 41 |
| Conread position: | 314-790 |
| Cow position: | chr23:8852607-8853072 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 237 |
| Conread position: | 314-790 |
| Cow position: | chr23:25884981-25884507 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 200 |
| Conread position: | 317-549 |
| Cow position: | chr23:39011896-39011664 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 9, 140 |
| Conread position: | 317-556 |
| Cow position: | chr23:12273803-12273570 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 102, 170 |
| Conread position: | 317-790 |
| Cow position: | chr23:18863302-18863763 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 337, 125 |
| Conread position: | 322-548 |
| Cow position: | chr23:23881824-23882038 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 324-548 |
| Cow position: | chr23:5240256-5240036 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 115 |
| Conread position: | 330-648 |
| Cow position: | chr23:5431826-5432120 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 54 |
| Conread position: | 388-648 |
| Cow position: | chr23:4793003-4792759 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 165 |
Show alignments to all cow chromosomes.