Cow genome map

Conread name: Tra1-TCH01D110036

Conread position: 287-647
Cow position: chr24:42977007-42977346 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 77

Conread position: 289-547
Cow position: chr24:41236716-41236461 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 17

Conread position: 292-549
Cow position: chr24:13307273-13307531 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 6

Conread position: 296-790
Cow position: chr24:30564657-30564165 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 264

Conread position: 303-790
Cow position: chr24:39408352-39408838 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 321
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 53

Conread position: 307-549
Cow position: chr24:11650592-11650351 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 131, 0

Conread position: 307-790
Cow position: chr24:33074614-33074123 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 319
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 216, 41

Conread position: 308-556
Cow position: chr24:14077734-14077983 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 242, 0

Conread position: 310-549
Cow position: chr24:5922067-5922306 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 313-549
Cow position: chr24:12030960-12030724 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 313-734
Cow position: chr24:16572167-16571761 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 292
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 202, 126

Conread position: 313-790
Cow position: chr24:31491210-31490747 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 319
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 326, 59

Conread position: 313-790
Cow position: chr24:42654530-42654064 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 238

Conread position: 313-790
Cow position: chr24:43937005-43936541 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 71

Conread position: 314-549
Cow position: chr24:2129543-2129777 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 119, 0

Conread position: 314-549
Cow position: chr24:5545336-5545108 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 0

Conread position: 314-549
Cow position: chr24:5915611-5915846 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 314-549
Cow position: chr24:38661487-38661251 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 189, 0

Conread position: 314-556
Cow position: chr24:9281676-9281436 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 102

Conread position: 314-587
Cow position: chr24:18565964-18566234 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 140

Conread position: 314-683
Cow position: chr24:37853406-37853052 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 338, 237

Conread position: 314-731
Cow position: chr24:5909561-5909964 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 237

Conread position: 314-790
Cow position: chr24:5911002-5911468 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 237

Conread position: 314-790
Cow position: chr24:6198517-6198052 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 237

Conread position: 314-790
Cow position: chr24:16979037-16979502 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 237

Conread position: 315-529
Cow position: chr24:35050712-35050924 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 316-788
Cow position: chr24:33115965-33115504 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 229

Conread position: 317-690
Cow position: chr24:25914746-25915108 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 234

Conread position: 317-790
Cow position: chr24:39199114-39199575 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 26

Conread position: 318-549
Cow position: chr24:45164414-45164190 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 319-547
Cow position: chr24:7036391-7036613 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 321-542
Cow position: chr24:8672571-8672794 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 29

Conread position: 322-540
Cow position: chr24:26660918-26661135 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 340-549
Cow position: chr24:22615968-22615760 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 340-790
Cow position: chr24:8350282-8350720 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 13, 59

Conread position: 352-547
Cow position: chr24:20029507-20029696 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 376-552
Cow position: chr24:10797016-10797191 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 382-732
Cow position: chr24:26694834-26695179 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 107, 16

Conread position: 401-687
Cow position: chr24:31669550-31669259 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 192
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 165, 89

Conread position: 409-648
Cow position: chr24:7778852-7778616 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 155, 72

Show alignments to all cow chromosomes.