Cow genome map
Conread name: | Tra1-TCH01D110036 |
Conread position: | 287-647 |
Cow position: | chr24:42977007-42977346 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 77 |
Conread position: | 289-547 |
Cow position: | chr24:41236716-41236461 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 183 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 5, 17 |
Conread position: | 292-549 |
Cow position: | chr24:13307273-13307531 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 6 |
Conread position: | 296-790 |
Cow position: | chr24:30564657-30564165 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 264 |
Conread position: | 303-790 |
Cow position: | chr24:39408352-39408838 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 321 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 31, 53 |
Conread position: | 307-549 |
Cow position: | chr24:11650592-11650351 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 178 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 307-790 |
Cow position: | chr24:33074614-33074123 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 319 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 216, 41 |
Conread position: | 308-556 |
Cow position: | chr24:14077734-14077983 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 171 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 242, 0 |
Conread position: | 310-549 |
Cow position: | chr24:5922067-5922306 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 175 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 313-549 |
Cow position: | chr24:12030960-12030724 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 176 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 313-734 |
Cow position: | chr24:16572167-16571761 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 292 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 202, 126 |
Conread position: | 313-790 |
Cow position: | chr24:31491210-31490747 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 319 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 326, 59 |
Conread position: | 313-790 |
Cow position: | chr24:42654530-42654064 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 341, 238 |
Conread position: | 313-790 |
Cow position: | chr24:43937005-43936541 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 339, 71 |
Conread position: | 314-549 |
Cow position: | chr24:2129543-2129777 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 170 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 314-549 |
Cow position: | chr24:5545336-5545108 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 175 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 314-549 |
Cow position: | chr24:5915611-5915846 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 173 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr24:38661487-38661251 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 175 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 189, 0 |
Conread position: | 314-556 |
Cow position: | chr24:9281676-9281436 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 173 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 30, 102 |
Conread position: | 314-587 |
Cow position: | chr24:18565964-18566234 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 140 |
Conread position: | 314-683 |
Cow position: | chr24:37853406-37853052 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 258 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 338, 237 |
Conread position: | 314-731 |
Cow position: | chr24:5909561-5909964 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 237 |
Conread position: | 314-790 |
Cow position: | chr24:5911002-5911468 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 237 |
Conread position: | 314-790 |
Cow position: | chr24:6198517-6198052 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 237 |
Conread position: | 314-790 |
Cow position: | chr24:16979037-16979502 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 237 |
Conread position: | 315-529 |
Cow position: | chr24:35050712-35050924 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 141 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 316-788 |
Cow position: | chr24:33115965-33115504 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 336, 229 |
Conread position: | 317-690 |
Cow position: | chr24:25914746-25915108 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 337, 234 |
Conread position: | 317-790 |
Cow position: | chr24:39199114-39199575 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 26 |
Conread position: | 318-549 |
Cow position: | chr24:45164414-45164190 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 319-547 |
Cow position: | chr24:7036391-7036613 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 166 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 321-542 |
Cow position: | chr24:8672571-8672794 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 161 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 117, 29 |
Conread position: | 322-540 |
Cow position: | chr24:26660918-26661135 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 159 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 340-549 |
Cow position: | chr24:22615968-22615760 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 150 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 340-790 |
Cow position: | chr24:8350282-8350720 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 307 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 13, 59 |
Conread position: | 352-547 |
Cow position: | chr24:20029507-20029696 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 143 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 376-552 |
Cow position: | chr24:10797016-10797191 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 128 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 382-732 |
Cow position: | chr24:26694834-26695179 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 240 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 107, 16 |
Conread position: | 401-687 |
Cow position: | chr24:31669550-31669259 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 192 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 165, 89 |
Conread position: | 409-648 |
Cow position: | chr24:7778852-7778616 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 176 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 155, 72 |
Show alignments to all cow chromosomes.