Cow genome map


           Conread name:
           Tra1-TCH01D110036
        

               Conread position:
               287-647
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 77
               

               Conread position:
               289-547
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               5, 17
               

               Conread position:
               292-549
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               296-790
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 264
               

               Conread position:
               303-790
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               307-549
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               307-790
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               319
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               216, 41
               

               Conread position:
               308-556
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               242, 0
               

               Conread position:
               310-549
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-734
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               292
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               202, 126
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               319
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               326, 59
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 238
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 71
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               314-556
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               30, 102
               

               Conread position:
               314-587
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 140
               

               Conread position:
               314-683
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               338, 237
               

               Conread position:
               314-731
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 237
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 237
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 237
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 237
               

               Conread position:
               315-529
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               316-788
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 229
               

               Conread position:
               317-690
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               337, 234
               

               Conread position:
               317-790
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               331, 26
               

               Conread position:
               318-549
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               319-547
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               321-542
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               117, 29
               

               Conread position:
               322-540
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               340-549
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               340-790
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               307
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               352-547
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               376-552
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               382-732
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               401-687
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               165, 89
               

               Conread position:
               409-648
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               155, 72
               
Show alignments to all cow chromosomes.