Cow genome map
Conread name: | Tra1-TCH01D110036 |
Conread position: | 1-313 |
Cow position: | chr29:13240329-13240013 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 17 |
Conread position: | 302-528 |
Cow position: | chr29:35764742-35764965 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 153, 13 |
Conread position: | 302-789 |
Cow position: | chr29:29943731-29944205 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 350, 10 |
Conread position: | 303-549 |
Cow position: | chr29:31859743-31859496 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 307-691 |
Cow position: | chr29:12168314-12168698 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 78 |
Conread position: | 310-462 |
Cow position: | chr29:28693102-28692950 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 310-480 |
Cow position: | chr29:32570417-32570245 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 313-509 |
Cow position: | chr29:23476042-23475846 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 147 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 313-549 |
Cow position: | chr29:40312677-40312914 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 0 |
Conread position: | 313-644 |
Cow position: | chr29:35767633-35767327 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 235 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 168, 0 |
Conread position: | 314-491 |
Cow position: | chr29:1749178-1749001 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 136 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 46, 34 |
Conread position: | 314-547 |
Cow position: | chr29:31821728-31821956 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 167 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 314-548 |
Cow position: | chr29:13860126-13860352 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 180 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 314-549 |
Cow position: | chr29:20302172-20301937 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 170 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr29:24138028-24137795 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 178 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 15, 103 |
Conread position: | 314-549 |
Cow position: | chr29:39006445-39006677 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 314-549 |
Cow position: | chr29:42987021-42986787 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 314-648 |
Cow position: | chr29:3348489-3348182 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 244 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 314-731 |
Cow position: | chr29:5150419-5149996 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 200 |
Conread position: | 314-787 |
Cow position: | chr29:592800-593258 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 237 |
Conread position: | 314-790 |
Cow position: | chr29:5928299-5927839 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 320 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 355, 16 |
Conread position: | 314-790 |
Cow position: | chr29:11403458-11402997 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 124 |
Conread position: | 314-790 |
Cow position: | chr29:17348714-17348253 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 320 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 340, 179 |
Conread position: | 314-790 |
Cow position: | chr29:22103456-22102994 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 237 |
Conread position: | 314-790 |
Cow position: | chr29:38372085-38372549 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 231 |
Conread position: | 317-549 |
Cow position: | chr29:23374933-23375165 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 322-553 |
Cow position: | chr29:1548193-1547960 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 156 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 150, 142 |
Conread position: | 322-557 |
Cow position: | chr29:6147041-6147277 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 177 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 233, 0 |
Conread position: | 322-650 |
Cow position: | chr29:5099344-5099656 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 234 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 283, 229 |
Conread position: | 352-545 |
Cow position: | chr29:10464324-10464133 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 352-690 |
Cow position: | chr29:28846769-28846441 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 241 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 293, 198 |
Conread position: | 352-731 |
Cow position: | chr29:34569069-34569434 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 259 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 61, 66 |
Conread position: | 355-549 |
Cow position: | chr29:1346523-1346328 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 133 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 103, 117 |
Conread position: | 368-788 |
Cow position: | chr29:17450760-17450337 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 281 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 157, 30 |
Conread position: | 391-549 |
Cow position: | chr29:8430331-8430489 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 609-775 |
Cow position: | chr29:35329511-35329679 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 84, 53 |
Show alignments to all cow chromosomes.