Cow genome map

Conread name: Tra1-TCH01D110036

Conread position: 282-549
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 40

Conread position: 295-542
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 37

Conread position: 299-641
Cow position:
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 16

Conread position: 299-790
Cow position:
Alignm length: 499
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 12

Conread position: 300-789
Cow position:
Alignm length: 498
Alignm identity: 324
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 209

Conread position: 303-549
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 178, 173

Conread position: 305-549
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 307-549
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 310-474
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 310-521
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 310-549
Cow position:
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 310-558
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 129

Conread position: 310-790
Cow position:
Alignm length: 489
Alignm identity: 324
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 342, 144

Conread position: 311-468
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 311-790
Cow position:
Alignm length: 494
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 27

Conread position: 312-548
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 86, 0

Conread position: 313-494
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 313-524
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 85, 0

Conread position: 313-549
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 212, 155

Conread position: 313-549
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 313-549
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 313-549
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 313-644
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 241

Conread position: 313-690
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 238

Conread position: 313-790
Cow position:
Alignm length: 486
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 42

Conread position: 313-790
Cow position:
Alignm length: 484
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 98

Conread position: 313-790
Cow position:
Alignm length: 485
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 77

Conread position: 313-790
Cow position:
Alignm length: 484
Alignm identity: 324
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 330, 53

Conread position: 313-790
Cow position:
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 238

Conread position: 314-461
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 314-533
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 314-537
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 16, 107

Conread position: 314-547
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 314-548
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 137, 0

Conread position: 314-549
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-549
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 0

Conread position: 314-549
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 180, 25

Conread position: 314-549
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 314-549
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 0

Conread position: 314-549
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 170, 0

Conread position: 314-549
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 60

Conread position: 314-549
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 140, 0

Conread position: 314-549
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 314-549
Cow position:
Alignm length: 236
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-549
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 314-553
Cow position:
Alignm length: 240
Alignm identity: 177
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 154, 0

Conread position: 314-553
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 314-556
Cow position:
Alignm length: 244
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 236, 0

Conread position: 314-556
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 23

Conread position: 314-644
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 103

Conread position: 314-788
Cow position:
Alignm length: 482
Alignm identity: 318
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 12, 37

Conread position: 314-790
Cow position:
Alignm length: 485
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 169

Conread position: 314-790
Cow position:
Alignm length: 485
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 238

Conread position: 314-790
Cow position:
Alignm length: 485
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 181

Conread position: 314-790
Cow position:
Alignm length: 487
Alignm identity: 318
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 105

Conread position: 314-790
Cow position:
Alignm length: 486
Alignm identity: 320
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 143

Conread position: 314-790
Cow position:
Alignm length: 486
Alignm identity: 316
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 175, 122

Conread position: 314-790
Cow position:
Alignm length: 485
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 222

Conread position: 316-549
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 317-545
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 317-553
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 317-558
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 233, 70

Conread position: 317-624
Cow position:
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 317-642
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 241, 13

Conread position: 317-683
Cow position:
Alignm length: 371
Alignm identity: 258
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 271, 98

Conread position: 317-743
Cow position:
Alignm length: 433
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 202

Conread position: 317-786
Cow position:
Alignm length: 477
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 234

Conread position: 317-790
Cow position:
Alignm length: 482
Alignm identity: 323
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 335, 103

Conread position: 319-549
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 319-585
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 128

Conread position: 321-549
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 162, 0

Conread position: 322-556
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 228, 0

Conread position: 322-740
Cow position:
Alignm length: 426
Alignm identity: 281
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 11, 28

Conread position: 322-790
Cow position:
Alignm length: 473
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 229

Conread position: 326-549
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 26, 12

Conread position: 330-544
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 335-549
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 337-548
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 41, 50

Conread position: 338-787
Cow position:
Alignm length: 459
Alignm identity: 305
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 312, 213

Conread position: 352-556
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 106

Conread position: 399-542
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 408-790
Cow position:
Alignm length: 392
Alignm identity: 255
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 144

Conread position: 415-648
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 31

Show alignments to all cow chromosomes.