Cow genome map


           Conread name:
           Tra1-TCH01D110036
        

               Conread position:
               281-549
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               296-731
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               290
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               306-648
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               307-790
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               323
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               125, 248
               

               Conread position:
               308-482
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 91
               

               Conread position:
               310-465
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-549
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-553
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               311-549
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               313-487
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-491
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               88, 166
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               325
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               143, 249
               

               Conread position:
               314-497
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               314-548
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               314-548
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               314-548
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               26, 156
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               314-556
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               236, 0
               

               Conread position:
               314-690
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               277, 83
               

               Conread position:
               314-731
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               340, 168
               

               Conread position:
               314-782
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               393, 24
               

               Conread position:
               314-787
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 238
               

               Conread position:
               314-788
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               236, 105
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               322
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 260
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 237
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               338, 182
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 82
               

               Conread position:
               317-468
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-790
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 234
               

               Conread position:
               317-790
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               308
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               329, 166
               

               Conread position:
               319-544
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               319-549
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               323-642
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               67, 117
               

               Conread position:
               338-790
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               304
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               340-549
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               352-549
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               358-683
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               366-790
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               277
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               292, 72
               

               Conread position:
               399-786
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               244, 147
               

               Conread position:
               565-790
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 195
               
Show alignments to all cow chromosomes.