Cow genome map
Conread name: | Tra1-TCH01D110036 |
Conread position: | 284-479 |
Cow position: | chr7:32895817-32896013 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 292-698 |
Cow position: | chr7:4598338-4597940 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 234 |
Conread position: | 292-790 |
Cow position: | chr7:6375944-6376423 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 332 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 364, 19 |
Conread position: | 299-556 |
Cow position: | chr7:27259552-27259819 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 182 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 307-790 |
Cow position: | chr7:46244459-46243986 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 345, 239 |
Conread position: | 309-790 |
Cow position: | chr7:936043-935569 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 318 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 216, 41 |
Conread position: | 310-468 |
Cow position: | chr7:37935905-37935748 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 310-549 |
Cow position: | chr7:18103608-18103366 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 179 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 190, 182 |
Conread position: | 310-648 |
Cow position: | chr7:6010374-6010696 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 241 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 5, 241 |
Conread position: | 312-549 |
Cow position: | chr7:18109555-18109331 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 169, 0 |
Conread position: | 312-549 |
Cow position: | chr7:52897462-52897229 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 179 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 313-480 |
Cow position: | chr7:7867310-7867475 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 40, 88 |
Conread position: | 313-545 |
Cow position: | chr7:21993297-21993071 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 175 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 313-549 |
Cow position: | chr7:9438134-9437896 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 172 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 215, 74 |
Conread position: | 313-549 |
Cow position: | chr7:16632658-16632423 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 18, 86 |
Conread position: | 313-648 |
Cow position: | chr7:28434289-28433973 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 44 |
Conread position: | 313-731 |
Cow position: | chr7:14318940-14319345 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 335, 238 |
Conread position: | 313-786 |
Cow position: | chr7:43355396-43354935 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 315 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 39, 88 |
Conread position: | 313-790 |
Cow position: | chr7:2411381-2411847 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 318 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 336, 238 |
Conread position: | 313-790 |
Cow position: | chr7:3872484-3872951 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 239 |
Conread position: | 313-790 |
Cow position: | chr7:50562723-50562258 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 240 |
Conread position: | 313-790 |
Cow position: | chr7:61215594-61215122 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 335, 238 |
Conread position: | 314-466 |
Cow position: | chr7:14387294-14387446 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 113 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-471 |
Cow position: | chr7:52433798-52433954 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 314-528 |
Cow position: | chr7:49095354-49095140 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 80, 210 |
Conread position: | 314-548 |
Cow position: | chr7:3664692-3664459 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 175 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 130, 84 |
Conread position: | 314-549 |
Cow position: | chr7:8333937-8333702 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 172 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 144, 204 |
Conread position: | 314-549 |
Cow position: | chr7:27265194-27265429 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 173 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr7:32817006-32817241 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr7:40498211-40497977 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 314-549 |
Cow position: | chr7:41081233-41080998 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 174 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 314-549 |
Cow position: | chr7:41789766-41789532 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 314-555 |
Cow position: | chr7:51496997-51496752 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 182 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 18, 123 |
Conread position: | 314-556 |
Cow position: | chr7:1438730-1438972 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 180 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 22, 145 |
Conread position: | 314-556 |
Cow position: | chr7:8254383-8254141 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 181 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 236, 169 |
Conread position: | 314-648 |
Cow position: | chr7:10479488-10479818 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 53 |
Conread position: | 314-648 |
Cow position: | chr7:10906239-10906573 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 215 |
Conread position: | 314-650 |
Cow position: | chr7:1846997-1846679 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 0 |
Conread position: | 314-690 |
Cow position: | chr7:66941286-66941646 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 342, 129 |
Conread position: | 314-790 |
Cow position: | chr7:10726732-10726269 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 324 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 338, 115 |
Conread position: | 314-790 |
Cow position: | chr7:19655245-19655709 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 237 |
Conread position: | 314-790 |
Cow position: | chr7:40523415-40522951 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 119 |
Conread position: | 314-790 |
Cow position: | chr7:65172585-65172131 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 316 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 340, 58 |
Conread position: | 317-539 |
Cow position: | chr7:461263-461481 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 152 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 317-549 |
Cow position: | chr7:13840573-13840798 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 175 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 19, 175 |
Conread position: | 317-549 |
Cow position: | chr7:16649234-16649464 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 171 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 27, 34 |
Conread position: | 317-549 |
Cow position: | chr7:42905884-42906117 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 170 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 177, 0 |
Conread position: | 317-549 |
Cow position: | chr7:56929585-56929817 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 317-694 |
Cow position: | chr7:50806136-50805769 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 279 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 49, 125 |
Conread position: | 317-731 |
Cow position: | chr7:5993255-5993656 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 281 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 333, 46 |
Conread position: | 317-790 |
Cow position: | chr7:63711600-63711138 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 337, 234 |
Conread position: | 318-789 |
Cow position: | chr7:30949691-30950153 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 235 |
Conread position: | 318-790 |
Cow position: | chr7:14861151-14861641 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 268 |
Conread position: | 322-790 |
Cow position: | chr7:37784042-37783589 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 319 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 31, 48 |
Conread position: | 325-549 |
Cow position: | chr7:16631346-16631123 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 127 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 59, 74 |
Conread position: | 326-790 |
Cow position: | chr7:13419787-13420238 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 328, 157 |
Conread position: | 331-790 |
Cow position: | chr7:7870807-7871253 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 309 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 22, 68 |
Conread position: | 335-790 |
Cow position: | chr7:2992980-2993420 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 309 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 17, 64 |
Conread position: | 340-549 |
Cow position: | chr7:61968942-61969148 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 153 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 352-544 |
Cow position: | chr7:21992251-21992059 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 141 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 357-690 |
Cow position: | chr7:40542467-40542151 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 231 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 148, 195 |
Conread position: | 367-556 |
Cow position: | chr7:19665301-19665489 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 383-790 |
Cow position: | chr7:3657567-3657170 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 276 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 56, 168 |
Show alignments to all cow chromosomes.