Cow genome map

Conread name: Tra1-TCH01D110036

Conread position: 284-479
Cow position: chr7:32895817-32896013 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 292-698
Cow position: chr7:4598338-4597940 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 234

Conread position: 292-790
Cow position: chr7:6375944-6376423 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 332
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 364, 19

Conread position: 299-556
Cow position: chr7:27259552-27259819 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 307-790
Cow position: chr7:46244459-46243986 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 239

Conread position: 309-790
Cow position: chr7:936043-935569 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 318
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 216, 41

Conread position: 310-468
Cow position: chr7:37935905-37935748 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 125, 0

Conread position: 310-549
Cow position: chr7:18103608-18103366 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 190, 182

Conread position: 310-648
Cow position: chr7:6010374-6010696 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 5, 241

Conread position: 312-549
Cow position: chr7:18109555-18109331 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 169, 0

Conread position: 312-549
Cow position: chr7:52897462-52897229 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 0

Conread position: 313-480
Cow position: chr7:7867310-7867475 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 88

Conread position: 313-545
Cow position: chr7:21993297-21993071 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 95, 0

Conread position: 313-549
Cow position: chr7:9438134-9437896 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 215, 74

Conread position: 313-549
Cow position: chr7:16632658-16632423 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 86

Conread position: 313-648
Cow position: chr7:28434289-28433973 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 313-731
Cow position: chr7:14318940-14319345 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 238

Conread position: 313-786
Cow position: chr7:43355396-43354935 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 315
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 88

Conread position: 313-790
Cow position: chr7:2411381-2411847 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 318
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 336, 238

Conread position: 313-790
Cow position: chr7:3872484-3872951 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 239

Conread position: 313-790
Cow position: chr7:50562723-50562258 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 240

Conread position: 313-790
Cow position: chr7:61215594-61215122 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 238

Conread position: 314-466
Cow position: chr7:14387294-14387446 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 314-471
Cow position: chr7:52433798-52433954 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 314-528
Cow position: chr7:49095354-49095140 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 80, 210

Conread position: 314-548
Cow position: chr7:3664692-3664459 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 130, 84

Conread position: 314-549
Cow position: chr7:8333937-8333702 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 144, 204

Conread position: 314-549
Cow position: chr7:27265194-27265429 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 314-549
Cow position: chr7:32817006-32817241 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 314-549
Cow position: chr7:40498211-40497977 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 314-549
Cow position: chr7:41081233-41080998 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 314-549
Cow position: chr7:41789766-41789532 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 314-555
Cow position: chr7:51496997-51496752 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 123

Conread position: 314-556
Cow position: chr7:1438730-1438972 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 145

Conread position: 314-556
Cow position: chr7:8254383-8254141 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 236, 169

Conread position: 314-648
Cow position: chr7:10479488-10479818 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 53

Conread position: 314-648
Cow position: chr7:10906239-10906573 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 215

Conread position: 314-650
Cow position: chr7:1846997-1846679 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 314-690
Cow position: chr7:66941286-66941646 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 129

Conread position: 314-790
Cow position: chr7:10726732-10726269 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 338, 115

Conread position: 314-790
Cow position: chr7:19655245-19655709 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 237

Conread position: 314-790
Cow position: chr7:40523415-40522951 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 119

Conread position: 314-790
Cow position: chr7:65172585-65172131 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 316
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 340, 58

Conread position: 317-539
Cow position: chr7:461263-461481 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 317-549
Cow position: chr7:13840573-13840798 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 175

Conread position: 317-549
Cow position: chr7:16649234-16649464 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 27, 34

Conread position: 317-549
Cow position: chr7:42905884-42906117 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 177, 0

Conread position: 317-549
Cow position: chr7:56929585-56929817 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 317-694
Cow position: chr7:50806136-50805769 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 49, 125

Conread position: 317-731
Cow position: chr7:5993255-5993656 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 281
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 333, 46

Conread position: 317-790
Cow position: chr7:63711600-63711138 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 234

Conread position: 318-789
Cow position: chr7:30949691-30950153 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 235

Conread position: 318-790
Cow position: chr7:14861151-14861641 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 268

Conread position: 322-790
Cow position: chr7:37784042-37783589 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 319
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 48

Conread position: 325-549
Cow position: chr7:16631346-16631123 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 74

Conread position: 326-790
Cow position: chr7:13419787-13420238 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 157

Conread position: 331-790
Cow position: chr7:7870807-7871253 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 309
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 68

Conread position: 335-790
Cow position: chr7:2992980-2993420 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 309
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 17, 64

Conread position: 340-549
Cow position: chr7:61968942-61969148 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 352-544
Cow position: chr7:21992251-21992059 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 357-690
Cow position: chr7:40542467-40542151 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 148, 195

Conread position: 367-556
Cow position: chr7:19665301-19665489 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 383-790
Cow position: chr7:3657567-3657170 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 276
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 56, 168

Show alignments to all cow chromosomes.