Cow genome map
| Conread name: | Tra1-TCH01D110036 |
| Conread position: | 292-549 |
| Cow position: | chr8:47894005-47893748 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 64 |
| Conread position: | 302-548 |
| Cow position: | chr8:52143216-52142971 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 308-790 |
| Cow position: | chr8:26830689-26830220 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 346, 238 |
| Conread position: | 310-478 |
| Cow position: | chr8:4464270-4464102 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 310-483 |
| Cow position: | chr8:26824692-26824519 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 310-516 |
| Cow position: | chr8:18497283-18497489 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 310-648 |
| Cow position: | chr8:39625446-39625765 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 312-790 |
| Cow position: | chr8:32259118-32259577 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 238 |
| Conread position: | 313-520 |
| Cow position: | chr8:32449606-32449807 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 313-528 |
| Cow position: | chr8:8681433-8681218 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-549 |
| Cow position: | chr8:24287829-24288066 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 313-549 |
| Cow position: | chr8:44477456-44477691 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 313-549 |
| Cow position: | chr8:49244011-49243779 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 313-549 |
| Cow position: | chr8:54002414-54002649 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 313-690 |
| Cow position: | chr8:37682521-37682159 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 218, 238 |
| Conread position: | 313-694 |
| Cow position: | chr8:58328198-58327823 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 18 |
| Conread position: | 314-547 |
| Cow position: | chr8:8708155-8707925 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 101, 64 |
| Conread position: | 314-548 |
| Cow position: | chr8:36079624-36079392 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 314-549 |
| Cow position: | chr8:37721348-37721579 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 314-549 |
| Cow position: | chr8:39791688-39791451 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 314-549 |
| Cow position: | chr8:43059136-43058900 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 314-549 |
| Cow position: | chr8:45301748-45301513 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-550 |
| Cow position: | chr8:21792067-21792303 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-648 |
| Cow position: | chr8:5731625-5731312 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 314-774 |
| Cow position: | chr8:45115159-45114682 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 16 |
| Conread position: | 314-787 |
| Cow position: | chr8:36032080-36032541 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 322 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 336, 84 |
| Conread position: | 314-790 |
| Cow position: | chr8:6688882-6689339 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 325 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 340, 110 |
| Conread position: | 314-790 |
| Cow position: | chr8:10138891-10139357 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 237 |
| Conread position: | 314-790 |
| Cow position: | chr8:14054985-14054530 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 314-790 |
| Cow position: | chr8:19874667-19875128 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 236 |
| Conread position: | 314-790 |
| Cow position: | chr8:23120351-23119886 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 240 |
| Conread position: | 314-790 |
| Cow position: | chr8:43051802-43051339 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 125 |
| Conread position: | 314-790 |
| Cow position: | chr8:51965336-51964872 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 188 |
| Conread position: | 314-790 |
| Cow position: | chr8:54619844-54620304 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 313 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 317-549 |
| Cow position: | chr8:1364919-1364686 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 317-549 |
| Cow position: | chr8:52243395-52243625 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 317-549 |
| Cow position: | chr8:52574895-52574663 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-556 |
| Cow position: | chr8:7321884-7322124 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 233, 0 |
| Conread position: | 317-790 |
| Cow position: | chr8:22179544-22180008 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 314 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 16, 235 |
| Conread position: | 319-690 |
| Cow position: | chr8:40094260-40093905 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 18 |
| Conread position: | 327-790 |
| Cow position: | chr8:33520090-33520569 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 190 |
| Conread position: | 352-558 |
| Cow position: | chr8:22495259-22495053 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 198, 104 |
| Conread position: | 358-648 |
| Cow position: | chr8:35906331-35906067 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 383-562 |
| Cow position: | chr8:32273430-32273611 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 516-647 |
| Cow position: | chr8:33350869-33351003 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 16 |
Show alignments to all cow chromosomes.