Cow genome map


           Conread name:
           Tra1-TCH01D110036
        

               Conread position:
               298-690
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 254
               

               Conread position:
               308-454
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               308-789
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 105
               

               Conread position:
               310-556
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               311-648
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 200
               

               Conread position:
               313-468
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               313-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               313-556
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               237, 37
               

               Conread position:
               313-561
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               188, 169
               

               Conread position:
               313-690
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 239
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 238
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 50
               

               Conread position:
               313-790
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 127
               

               Conread position:
               314-547
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               67, 75
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               188, 36
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-549
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               314-550
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-553
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               314-556
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               314-556
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               236, 0
               

               Conread position:
               314-644
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 0
               

               Conread position:
               314-699
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               18, 234
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               219, 17
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               315
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               318
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               275, 51
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 227
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               322
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               338, 170
               

               Conread position:
               314-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 41
               

               Conread position:
               317-507
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               317-549
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               321-555
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               322-647
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               194, 76
               

               Conread position:
               323-651
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               324-577
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               105, 14
               

               Conread position:
               331-544
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               355-546
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               382-549
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               449-790
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 286
               
Show alignments to all cow chromosomes.