Cow genome map


           Conread name:
           Tra1-TCH01E010036
        

               Conread position:
               1-174
               

               Cow position:
               chr13:12976843-12977016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr13:56600770-56600562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               216, 56
               

               Conread position:
               1-246
               

               Cow position:
               chr13:23672124-23671880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               6-211
               

               Cow position:
               chr13:57807763-57807562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               8-308
               

               Cow position:
               chr13:56922163-56921862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 289
               

               Conread position:
               10-158
               

               Cow position:
               chr13:18093289-18093141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-298
               

               Cow position:
               chr13:15427200-15427465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               208, 26
               

               Conread position:
               63-445
               

               Cow position:
               chr13:37378281-37378662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               137, 177
               

               Conread position:
               210-472
               

               Cow position:
               chr13:29045543-29045273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               90, 59
               
Show alignments to all cow chromosomes.