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Cow genome map

           
Conread name:
           
Tra1-TCH01E040033
        

               
Conread position:
               
1-274
               

               
Cow position:
               
chr14:27044669-27044952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
173, 24
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr14:27591852-27592038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr14:35503466-35503200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 205
               

               
Conread position:
               
4-143
               

               
Cow position:
               
chr14:46062048-46061906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-145
               

               
Cow position:
               
chr14:29029930-29029791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr14:5573043-5572883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
157, 21
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr14:49767567-49767403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chr14:39778856-39778690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-172
               

               
Cow position:
               
chr14:18904509-18904671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr14:25399174-25399001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr14:1868284-1868453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr14:33309406-33309573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr14:24981555-24981388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr14:41837771-41837943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr14:4282407-4282579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr14:16256869-16256686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr14:19372442-19372266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr14:46998137-46997954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr14:14316983-14316800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr14:19129610-19129417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr14:803788-803592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr14:18763343-18763527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr14:26097591-26097784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr14:42437126-42436932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr14:43453078-43453281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr14:3943452-3943646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
187, 27
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr14:4991106-4990908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr14:17238454-17238266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr14:19394460-19394267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
175, 18
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr14:7420952-7421164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr14:4202993-4203217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 180
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr14:41127995-41127779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
216, 26
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr14:49727507-49727285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr14:41809555-41809792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr14:12511800-12512029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
214, 29
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr14:29809400-29809154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 187
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:1796291-1796056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:15504053-15504298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:16524577-16524328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 185
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:16549903-16550135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
218, 27
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:19594029-19594276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 181
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:22941621-22941881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:23424358-23424124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:27394362-27394605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:33247331-33247561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
216, 27
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:42419173-42419420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 21
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:45052541-45052297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
181, 36
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr14:48427174-48426931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr14:8786451-8786679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr14:10693158-10693399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
214, 22
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr14:47672786-47673024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
221, 27
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr14:8923482-8923743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
170, 29
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr14:28115085-28115347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
122, 21
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr14:2974990-2975243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr14:21357661-21357394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr14:23443119-23442864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr14:38144008-38144268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
218, 30
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr14:20640526-20640791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr14:40474662-40474397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
216, 27
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr14:11643155-11643410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr14:50362896-50362628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
219, 37
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr14:39434159-39434420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
216, 18
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr14:15313664-15313386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr14:10078370-10078086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
171, 37
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr14:6541623-6541898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 37
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr14:12081037-12081299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr14:35381691-35381408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 20
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr14:35420662-35420936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr14:23103895-23104171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr14:20712589-20712864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
250, 74
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr14:29965118-29964840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 14
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr14:36442916-36443195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
216, 37
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr14:6735758-6736058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr14:6655480-6655770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr14:12244281-12244561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 179
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr14:11846596-11846304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr14:33456940-33457239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 170
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr14:25225832-25225531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr14:24945389-24945639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr14:22989134-22988855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
215, 20
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr14:28795773-28795570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr14:3868328-3868618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
214, 19
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr14:19850926-19851218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
199, 19
               

               
Conread position:
               
7-143
               

               
Cow position:
               
chr14:26191004-26191140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-163
               

               
Cow position:
               
chr14:3498904-3498749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
7-175
               

               
Cow position:
               
chr14:48412782-48412950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-176
               

               
Cow position:
               
chr14:35018653-35018822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
7-199
               

               
Cow position:
               
chr14:37883816-37884008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-210
               

               
Cow position:
               
chr14:32574266-32574058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr14:15306025-15306254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr14:7067630-7067869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
7-245
               

               
Cow position:
               
chr14:38550385-38550618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
7-246
               

               
Cow position:
               
chr14:13465120-13465366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr14:5630259-5630029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
213, 24
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr14:26222842-26222597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr14:33546256-33546498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
7-248
               

               
Cow position:
               
chr14:49488059-49487824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr14:8541117-8541348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
213, 23
               

               
Conread position:
               
7-250
               

               
Cow position:
               
chr14:30756940-30756699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
213, 24
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr14:15404796-15404550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
166, 18
               

               
Conread position:
               
7-257
               

               
Cow position:
               
chr14:37902097-37901851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr14:12634789-12635035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr14:40001879-40002141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr14:40230541-40230793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
7-272
               

               
Cow position:
               
chr14:14979609-14979869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
7-272
               

               
Cow position:
               
chr14:48447066-48447325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr14:5025380-5025117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
127, 13
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr14:32452350-32452090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
31, 197
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chr14:7198600-7198333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 247
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr14:14949115-14949379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
213, 15
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr14:28378458-28378182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 34
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr14:1803016-1803293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr14:20016607-20016882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr14:33341854-33341577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
180, 112
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr14:37103310-37103032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr14:40329541-40329264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr14:25682026-25681738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
181, 15
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr14:24922199-24921919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr14:11470051-11470329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr14:39452306-39452023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
203, 18
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chr14:12146381-12146669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr14:28304686-28304978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr14:44557714-44558021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr14:15944570-15944878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
191, 87
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr14:27338439-27338110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
213, 20
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr14:22583244-22583062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
8-244
               

               
Cow position:
               
chr14:7695364-7695127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr14:8101887-8101659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
212, 31
               

               
Conread position:
               
8-248
               

               
Cow position:
               
chr14:24527064-24527303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
212, 17
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr14:20110623-20110867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
215, 174
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr14:21371684-21371942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
8-275
               

               
Cow position:
               
chr14:14327012-14327288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr14:21933243-21933512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 177
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr14:24236924-24236645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
115, 175
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr14:17335249-17335553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
9-176
               

               
Cow position:
               
chr14:8470351-8470525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-178
               

               
Cow position:
               
chr14:26490647-26490815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr14:49929645-49929880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
9-246
               

               
Cow position:
               
chr14:27504135-27504376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
9-248
               

               
Cow position:
               
chr14:21305876-21305633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr14:41190988-41191240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
9-286
               

               
Cow position:
               
chr14:20010213-20010488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr14:12855698-12855979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
211, 13
               

               
Conread position:
               
9-297
               

               
Cow position:
               
chr14:28153650-28153932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
211, 39
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr14:11285671-11285452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr14:5553415-5553179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
210, 15
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr14:40754150-40754385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
208, 172
               

               
Conread position:
               
10-250
               

               
Cow position:
               
chr14:26655039-26655279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
210, 15
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr14:8867468-8867734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
10-286
               

               
Cow position:
               
chr14:7480110-7479832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
10-286
               

               
Cow position:
               
chr14:35532941-35533215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr14:1708561-1708841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr14:13582656-13582941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr14:40283717-40283528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
11-224
               

               
Cow position:
               
chr14:25111596-25111382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr14:38719299-38719072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
67, 202
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr14:48496053-48496288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
207, 21
               

               
Conread position:
               
11-270
               

               
Cow position:
               
chr14:26628428-26628688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
207, 20
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr14:34775654-34775918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 11
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr14:19618657-19618871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
200, 32
               

               
Conread position:
               
12-248
               

               
Cow position:
               
chr14:11043397-11043634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
157, 13
               

               
Conread position:
               
12-249
               

               
Cow position:
               
chr14:6599860-6600093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 150
               

               
Conread position:
               
12-305
               

               
Cow position:
               
chr14:44237631-44237926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
13-249
               

               
Cow position:
               
chr14:28784397-28784629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
210, 27
               

               
Conread position:
               
14-299
               

               
Cow position:
               
chr14:38168784-38168516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
204, 27
               

               
Conread position:
               
15-270
               

               
Cow position:
               
chr14:7036265-7036518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
205, 232
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr14:27355490-27355222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr14:28694630-28694886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
201, 6
               

               
Conread position:
               
20-151
               

               
Cow position:
               
chr14:13704517-13704385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
20-249
               

               
Cow position:
               
chr14:26796698-26796941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr14:45291292-45291496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
22-180
               

               
Cow position:
               
chr14:39037307-39037153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
22-235
               

               
Cow position:
               
chr14:5995891-5995678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr14:12141822-12142078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
22-287
               

               
Cow position:
               
chr14:4193164-4193433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
198, 10
               

               
Conread position:
               
23-249
               

               
Cow position:
               
chr14:28465134-28465359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
25-246
               

               
Cow position:
               
chr14:26172313-26172535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
195, 10
               

               
Conread position:
               
25-249
               

               
Cow position:
               
chr14:21201743-21201961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
195, 10
               

               
Conread position:
               
25-286
               

               
Cow position:
               
chr14:26859652-26859917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr14:19592543-19592272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 267
               

               
Conread position:
               
25-304
               

               
Cow position:
               
chr14:15931958-15931678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
195, 221
               

               
Conread position:
               
26-246
               

               
Cow position:
               
chr14:20954765-20954544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
194, 149
               

               
Conread position:
               
27-200
               

               
Cow position:
               
chr14:30431488-30431661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-194
               

               
Cow position:
               
chr14:34448892-34449058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-249
               

               
Cow position:
               
chr14:26919074-26918852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
29-272
               

               
Cow position:
               
chr14:45955356-45955121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
191, 13
               

               
Conread position:
               
31-247
               

               
Cow position:
               
chr14:39415237-39415019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
31-283
               

               
Cow position:
               
chr14:16297866-16297622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 158
               

               
Conread position:
               
31-287
               

               
Cow position:
               
chr14:14812144-14812403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
32-186
               

               
Cow position:
               
chr14:16310577-16310422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
32-241
               

               
Cow position:
               
chr14:27077054-27076833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr14:27998961-27999180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
32-254
               

               
Cow position:
               
chr14:28131215-28131441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr14:37106677-37106416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
188, 52
               

               
Conread position:
               
33-178
               

               
Cow position:
               
chr14:17841218-17841362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
33-201
               

               
Cow position:
               
chr14:39618303-39618470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
33-240
               

               
Cow position:
               
chr14:437397-437607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
33-246
               

               
Cow position:
               
chr14:40486566-40486781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
33-249
               

               
Cow position:
               
chr14:20467005-20466795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
33-250
               

               
Cow position:
               
chr14:31130302-31130519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
33-272
               

               
Cow position:
               
chr14:6637152-6637389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
33-272
               

               
Cow position:
               
chr14:20501051-20500814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
187, 142
               

               
Conread position:
               
33-273
               

               
Cow position:
               
chr14:13822807-13822564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
17, 217
               

               
Conread position:
               
33-273
               

               
Cow position:
               
chr14:23419873-23419632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
5, 223
               

               
Conread position:
               
33-274
               

               
Cow position:
               
chr14:27823505-27823263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
187, 35
               

               
Conread position:
               
33-274
               

               
Cow position:
               
chr14:45045673-45045434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 117
               

               
Conread position:
               
33-282
               

               
Cow position:
               
chr14:18941210-18941458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
33-297
               

               
Cow position:
               
chr14:13846059-13845809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
187, 127
               

               
Conread position:
               
33-322
               

               
Cow position:
               
chr14:4848420-4848139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
185, 11
               

               
Conread position:
               
34-235
               

               
Cow position:
               
chr14:6490625-6490830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
34-245
               

               
Cow position:
               
chr14:26825264-26825051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
34-246
               

               
Cow position:
               
chr14:37446597-37446812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
34-249
               

               
Cow position:
               
chr14:44713494-44713275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
34-282
               

               
Cow position:
               
chr14:16237439-16237683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
130, 150
               

               
Conread position:
               
34-286
               

               
Cow position:
               
chr14:40952331-40952088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
159, 49
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr14:34399726-34399885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr14:31138667-31138833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr14:15424166-15423954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
35-246
               

               
Cow position:
               
chr14:47276625-47276839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
35-247
               

               
Cow position:
               
chr14:6085912-6086121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr14:10387731-10387518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
185, 55
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr14:12342766-12342982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr14:20984410-20984196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
185, 107
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr14:24748150-24748362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
35-249
               

               
Cow position:
               
chr14:20481771-20481993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
164, 79
               

               
Conread position:
               
35-254
               

               
Cow position:
               
chr14:12520230-12520449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
187, 158
               

               
Conread position:
               
35-268
               

               
Cow position:
               
chr14:49941080-49940854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
35-285
               

               
Cow position:
               
chr14:14466390-14466638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
35-289
               

               
Cow position:
               
chr14:1777771-1778024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
35-293
               

               
Cow position:
               
chr14:20301929-20302185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
185, 214
               

               
Conread position:
               
35-296
               

               
Cow position:
               
chr14:22645451-22645718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
185, 204
               

               
Conread position:
               
35-303
               

               
Cow position:
               
chr14:18937078-18937347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
185, 216
               

               
Conread position:
               
36-180
               

               
Cow position:
               
chr14:11031210-11031354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
36-200
               

               
Cow position:
               
chr14:45577021-45577185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
36-246
               

               
Cow position:
               
chr14:16749615-16749834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
146, 8
               

               
Conread position:
               
36-246
               

               
Cow position:
               
chr14:33578006-33578216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
184, 51
               

               
Conread position:
               
36-269
               

               
Cow position:
               
chr14:23078721-23078949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
184, 144
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr14:4227150-4227386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr14:13385439-13385203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
184, 136
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr14:36167007-36166782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
184, 57
               

               
Conread position:
               
36-274
               

               
Cow position:
               
chr14:36425340-36425571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
184, 29
               

               
Conread position:
               
36-284
               

               
Cow position:
               
chr14:28924239-28923989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 217
               

               
Conread position:
               
36-286
               

               
Cow position:
               
chr14:28244795-28245048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
184, 65
               

               
Conread position:
               
36-297
               

               
Cow position:
               
chr14:10609751-10609496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
187, 201
               

               
Conread position:
               
37-249
               

               
Cow position:
               
chr14:18309237-18309441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
183, 145
               

               
Conread position:
               
37-249
               

               
Cow position:
               
chr14:42247071-42246863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
37-293
               

               
Cow position:
               
chr14:27330812-27330551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
37-313
               

               
Cow position:
               
chr14:25986586-25986313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
83, 121
               

               
Conread position:
               
38-235
               

               
Cow position:
               
chr14:11311567-11311763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
182, 11
               

               
Conread position:
               
40-199
               

               
Cow position:
               
chr14:25824762-25824607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
40-250
               

               
Cow position:
               
chr14:25903598-25903390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
183, 145
               

               
Conread position:
               
40-287
               

               
Cow position:
               
chr14:20234126-20234366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
179, 146
               

               
Conread position:
               
41-200
               

               
Cow position:
               
chr14:33830367-33830211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
41-209
               

               
Cow position:
               
chr14:9110648-9110812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr14:29590542-29590712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
41-246
               

               
Cow position:
               
chr14:42423157-42422950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
41-249
               

               
Cow position:
               
chr14:5958921-5959134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
41-249
               

               
Cow position:
               
chr14:11056667-11056875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
151, 66
               

               
Conread position:
               
41-249
               

               
Cow position:
               
chr14:42330421-42330205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
41-286
               

               
Cow position:
               
chr14:7342521-7342289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 55
               

               
Conread position:
               
42-200
               

               
Cow position:
               
chr14:43454040-43453890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
42-235
               

               
Cow position:
               
chr14:30605852-30606047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
42-271
               

               
Cow position:
               
chr14:18558996-18559216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
178, 119
               

               
Conread position:
               
42-289
               

               
Cow position:
               
chr14:18302026-18301777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 84
               

               
Conread position:
               
42-302
               

               
Cow position:
               
chr14:12884328-12884074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr14:4109428-4109584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
43-293
               

               
Cow position:
               
chr14:31228022-31228274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
60, 139
               

               
Conread position:
               
43-303
               

               
Cow position:
               
chr14:11577132-11576880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
177, 91
               

               
Conread position:
               
44-235
               

               
Cow position:
               
chr14:35065752-35065559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
44-249
               

               
Cow position:
               
chr14:27733665-27733467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
178, 100
               

               
Conread position:
               
46-281
               

               
Cow position:
               
chr14:46432131-46431893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
48-249
               

               
Cow position:
               
chr14:18350798-18351008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
49-248
               

               
Cow position:
               
chr14:14224626-14224425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
50-250
               

               
Cow position:
               
chr14:9308122-9307924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
168, 124
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr14:29734307-29734531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
51-248
               

               
Cow position:
               
chr14:11783232-11783033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
169, 141
               

               
Conread position:
               
51-273
               

               
Cow position:
               
chr14:20245113-20245334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
169, 154
               

               
Conread position:
               
52-277
               

               
Cow position:
               
chr14:24537220-24536996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
168, 194
               

               
Conread position:
               
54-183
               

               
Cow position:
               
chr14:21406657-21406786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
54-242
               

               
Cow position:
               
chr14:24732290-24732100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
54-245
               

               
Cow position:
               
chr14:22263358-22263167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
161, 112
               

               
Conread position:
               
54-272
               

               
Cow position:
               
chr14:27364631-27364417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
58-283
               

               
Cow position:
               
chr14:16287531-16287313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
58-299
               

               
Cow position:
               
chr14:28957939-28957701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
162, 188
               

               
Conread position:
               
59-280
               

               
Cow position:
               
chr14:17563975-17563748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
60-270
               

               
Cow position:
               
chr14:35421033-35421245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
62-196
               

               
Cow position:
               
chr14:4209551-4209417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
62-252
               

               
Cow position:
               
chr14:13515947-13516136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
158, 52
               

               
Conread position:
               
63-293
               

               
Cow position:
               
chr14:18270403-18270172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
157, 5
               

               
Conread position:
               
66-201
               

               
Cow position:
               
chr14:34586359-34586220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
66-312
               

               
Cow position:
               
chr14:30023156-30023404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
152, 226
               

               
Conread position:
               
67-249
               

               
Cow position:
               
chr14:7316834-7316652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 134
               

               
Conread position:
               
67-283
               

               
Cow position:
               
chr14:7094017-7094234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 185
               

               
Conread position:
               
68-194
               

               
Cow position:
               
chr14:26456412-26456286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
68-270
               

               
Cow position:
               
chr14:37436671-37436886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
68-287
               

               
Cow position:
               
chr14:18412552-18412771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
152, 178
               

               
Conread position:
               
70-252
               

               
Cow position:
               
chr14:50519142-50519321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
150, 114
               

               
Conread position:
               
70-270
               

               
Cow position:
               
chr14:34210577-34210772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
70-295
               

               
Cow position:
               
chr14:35651748-35651965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
71-246
               

               
Cow position:
               
chr14:4868118-4867941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
71-249
               

               
Cow position:
               
chr14:24785694-24785518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
151, 113
               

               
Conread position:
               
71-298
               

               
Cow position:
               
chr14:27303694-27303469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
117, 143
               

               
Conread position:
               
72-247
               

               
Cow position:
               
chr14:8083234-8083057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
7, 101
               

               
Conread position:
               
74-305
               

               
Cow position:
               
chr14:21946426-21946197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
75-249
               

               
Cow position:
               
chr14:46490432-46490609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 140
               

               
Conread position:
               
76-246
               

               
Cow position:
               
chr14:20736642-20736476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
77-272
               

               
Cow position:
               
chr14:41289219-41289412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 170
               

               
Conread position:
               
78-249
               

               
Cow position:
               
chr14:41623347-41623185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
79-274
               

               
Cow position:
               
chr14:5668090-5668283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
139, 174
               

               
Conread position:
               
81-281
               

               
Cow position:
               
chr14:20483672-20483877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 176
               

               
Conread position:
               
82-269
               

               
Cow position:
               
chr14:21530051-21530240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
82-291
               

               
Cow position:
               
chr14:33468795-33468607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
86-289
               

               
Cow position:
               
chr14:8027539-8027745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 171
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr14:29282774-29282577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
132, 165
               

               
Conread position:
               
90-311
               

               
Cow position:
               
chr14:20010488-20010709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 163
               

               
Conread position:
               
94-249
               

               
Cow position:
               
chr14:20513243-20513086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
94-293
               

               
Cow position:
               
chr14:36559213-36559407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 88
               

               
Conread position:
               
95-271
               

               
Cow position:
               
chr14:12138029-12137853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
97-248
               

               
Cow position:
               
chr14:31342222-31342069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
101-248
               

               
Cow position:
               
chr14:21592997-21593142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 83
               

               
Conread position:
               
101-290
               

               
Cow position:
               
chr14:11981473-11981285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
107-239
               

               
Cow position:
               
chr14:37236370-37236236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
107-249
               

               
Cow position:
               
chr14:37504515-37504371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
107-299
               

               
Cow position:
               
chr14:16344146-16344331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
113, 130
               

               
Conread position:
               
109-293
               

               
Cow position:
               
chr14:41871589-41871772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
111-299
               

               
Cow position:
               
chr14:12071528-12071715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 142
               

               
Conread position:
               
114-290
               

               
Cow position:
               
chr14:5044664-5044497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
119-290
               

               
Cow position:
               
chr14:19988071-19988241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
101, 128
               

               
Conread position:
               
129-283
               

               
Cow position:
               
chr14:15795942-15796094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 121
               

               
Conread position:
               
138-257
               

               
Cow position:
               
chr14:41706451-41706572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               
Show alignments to all cow chromosomes.