Cow genome map
| Conread name: | Tra1-TCH01E040033 |
| Conread position: | 3-270 |
| Cow position: | chr18:727940-728188 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 209, 88 |
| Conread position: | 3-298 |
| Cow position: | chr18:52647739-52647447 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 217, 236 |
| Conread position: | 3-303 |
| Cow position: | chr18:51212750-51213044 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 200, 30 |
| Conread position: | 4-165 |
| Cow position: | chr18:4182281-4182121 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 4-169 |
| Cow position: | chr18:33299810-33299975 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 4-174 |
| Cow position: | chr18:18369454-18369286 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 4-174 |
| Cow position: | chr18:44801981-44801813 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-177 |
| Cow position: | chr18:2619304-2619134 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 4-178 |
| Cow position: | chr18:51850649-51850484 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 4-178 |
| Cow position: | chr18:56301798-56301972 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 4-180 |
| Cow position: | chr18:10656343-10656521 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 4-180 |
| Cow position: | chr18:11377273-11377446 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 4-180 |
| Cow position: | chr18:30586314-30586143 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 4-181 |
| Cow position: | chr18:7952546-7952721 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 4-182 |
| Cow position: | chr18:11684889-11685066 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-183 |
| Cow position: | chr18:6609949-6609766 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 27 |
| Conread position: | 4-185 |
| Cow position: | chr18:55806723-55806547 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-188 |
| Cow position: | chr18:18524680-18524497 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 4-191 |
| Cow position: | chr18:2864086-2863897 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 4-191 |
| Cow position: | chr18:48242098-48242285 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 4-193 |
| Cow position: | chr18:4673214-4673399 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 4-193 |
| Cow position: | chr18:56159370-56159556 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 4-198 |
| Cow position: | chr18:10897942-10898132 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 96, 50 |
| Conread position: | 4-198 |
| Cow position: | chr18:32883215-32883401 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 4-198 |
| Cow position: | chr18:52635170-52634971 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 177 |
| Conread position: | 4-199 |
| Cow position: | chr18:22214390-22214587 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 180 |
| Conread position: | 4-200 |
| Cow position: | chr18:4871982-4872165 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-200 |
| Cow position: | chr18:5078867-5078672 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 4-200 |
| Cow position: | chr18:51392732-51392541 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-201 |
| Cow position: | chr18:2849363-2849164 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 4-201 |
| Cow position: | chr18:19883438-19883636 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 4-201 |
| Cow position: | chr18:21266412-21266609 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 159, 179 |
| Conread position: | 4-201 |
| Cow position: | chr18:48828872-48828672 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 106 |
| Conread position: | 4-233 |
| Cow position: | chr18:51691555-51691330 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 4-235 |
| Cow position: | chr18:20175283-20175058 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 218, 11 |
| Conread position: | 4-235 |
| Cow position: | chr18:28658000-28657778 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 216, 37 |
| Conread position: | 4-237 |
| Cow position: | chr18:4758131-4757891 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 4-239 |
| Cow position: | chr18:35535242-35535007 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 15, 172 |
| Conread position: | 4-245 |
| Cow position: | chr18:45104536-45104283 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 4-246 |
| Cow position: | chr18:53776382-53776624 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 200, 45 |
| Conread position: | 4-247 |
| Cow position: | chr18:12058912-12059142 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 4-248 |
| Cow position: | chr18:20308994-20309244 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 4-248 |
| Cow position: | chr18:35873986-35874227 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 216, 62 |
| Conread position: | 4-249 |
| Cow position: | chr18:2146679-2146442 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 125 |
| Conread position: | 4-249 |
| Cow position: | chr18:7956052-7956299 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 75, 235 |
| Conread position: | 4-249 |
| Cow position: | chr18:9365825-9366072 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 4-249 |
| Cow position: | chr18:22790179-22789940 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 216, 64 |
| Conread position: | 4-249 |
| Cow position: | chr18:23162801-23163044 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 178, 31 |
| Conread position: | 4-249 |
| Cow position: | chr18:39875350-39875095 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 184, 45 |
| Conread position: | 4-249 |
| Cow position: | chr18:40759115-40759371 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 150, 29 |
| Conread position: | 4-249 |
| Cow position: | chr18:47416902-47417150 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 37, 129 |
| Conread position: | 4-249 |
| Cow position: | chr18:50382164-50382400 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 178, 27 |
| Conread position: | 4-249 |
| Cow position: | chr18:51643459-51643219 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 154 |
| Conread position: | 4-249 |
| Cow position: | chr18:51757004-51757244 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 216, 26 |
| Conread position: | 4-249 |
| Cow position: | chr18:55505316-55505553 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 223, 28 |
| Conread position: | 4-255 |
| Cow position: | chr18:24759747-24759502 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 216, 31 |
| Conread position: | 4-269 |
| Cow position: | chr18:4556257-4555998 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 174, 34 |
| Conread position: | 4-270 |
| Cow position: | chr18:10977304-10977043 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 4-270 |
| Cow position: | chr18:12242183-12242444 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 4-270 |
| Cow position: | chr18:18919048-18918796 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 216, 28 |
| Conread position: | 4-271 |
| Cow position: | chr18:53642844-53642581 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 4-272 |
| Cow position: | chr18:5632174-5632434 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 216, 178 |
| Conread position: | 4-272 |
| Cow position: | chr18:10214287-10214017 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 188 |
| Conread position: | 4-272 |
| Cow position: | chr18:26355118-26354872 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 179, 18 |
| Conread position: | 4-274 |
| Cow position: | chr18:1954682-1954404 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 4-274 |
| Cow position: | chr18:49841187-49841458 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 4-275 |
| Cow position: | chr18:22569159-22568893 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 4-277 |
| Cow position: | chr18:39662688-39662960 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 28 |
| Conread position: | 4-279 |
| Cow position: | chr18:47392309-47392590 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 4-281 |
| Cow position: | chr18:1144277-1144014 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 216, 97 |
| Conread position: | 4-281 |
| Cow position: | chr18:49015034-49015291 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 4-281 |
| Cow position: | chr18:54572383-54572105 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 4-282 |
| Cow position: | chr18:49268081-49267796 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 216, 21 |
| Conread position: | 4-283 |
| Cow position: | chr18:3164605-3164334 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 4-283 |
| Cow position: | chr18:12584935-12584657 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 184 |
| Conread position: | 4-283 |
| Cow position: | chr18:21251889-21252168 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 4-284 |
| Cow position: | chr18:3211781-3212066 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 187 |
| Conread position: | 4-285 |
| Cow position: | chr18:55747595-55747869 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 215, 18 |
| Conread position: | 4-286 |
| Cow position: | chr18:49038368-49038635 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 217, 176 |
| Conread position: | 4-290 |
| Cow position: | chr18:10065620-10065332 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 101, 199 |
| Conread position: | 4-290 |
| Cow position: | chr18:51405997-51405730 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 216, 31 |
| Conread position: | 4-292 |
| Cow position: | chr18:7487160-7487424 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 216, 27 |
| Conread position: | 4-299 |
| Cow position: | chr18:24508330-24508030 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 73, 228 |
| Conread position: | 4-299 |
| Cow position: | chr18:29371777-29372065 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 26 |
| Conread position: | 5-186 |
| Cow position: | chr18:47511914-47512094 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 5-248 |
| Cow position: | chr18:44262536-44262772 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 5-249 |
| Cow position: | chr18:45903986-45903746 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 218, 40 |
| Conread position: | 5-270 |
| Cow position: | chr18:43797044-43796786 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 215, 27 |
| Conread position: | 5-270 |
| Cow position: | chr18:50959395-50959656 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 77, 26 |
| Conread position: | 5-290 |
| Cow position: | chr18:9089607-9089879 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 282, 90 |
| Conread position: | 5-299 |
| Cow position: | chr18:1571327-1571040 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 215, 28 |
| Conread position: | 6-198 |
| Cow position: | chr18:53038737-53038932 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 172 |
| Conread position: | 7-193 |
| Cow position: | chr18:19273190-19273001 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-198 |
| Cow position: | chr18:44028156-44027972 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-198 |
| Cow position: | chr18:51824319-51824502 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-200 |
| Cow position: | chr18:6130142-6129950 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-200 |
| Cow position: | chr18:19646086-19646277 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 171, 18 |
| Conread position: | 7-205 |
| Cow position: | chr18:10578947-10579144 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-233 |
| Cow position: | chr18:2774224-2774002 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 14 |
| Conread position: | 7-235 |
| Cow position: | chr18:30405751-30405522 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 7-246 |
| Cow position: | chr18:8880069-8880304 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 213, 18 |
| Conread position: | 7-247 |
| Cow position: | chr18:346589-346347 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 7-247 |
| Cow position: | chr18:42455115-42454871 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 7-248 |
| Cow position: | chr18:9066605-9066849 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 168 |
| Conread position: | 7-248 |
| Cow position: | chr18:19687932-19688177 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-248 |
| Cow position: | chr18:39623712-39623953 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 18 |
| Conread position: | 7-248 |
| Cow position: | chr18:41854678-41854440 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 213, 15 |
| Conread position: | 7-249 |
| Cow position: | chr18:4668586-4668356 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 213, 18 |
| Conread position: | 7-249 |
| Cow position: | chr18:22120969-22120735 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 171, 22 |
| Conread position: | 7-249 |
| Cow position: | chr18:24266498-24266253 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 7-249 |
| Cow position: | chr18:25598330-25598083 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 7-252 |
| Cow position: | chr18:29474652-29474891 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 127 |
| Conread position: | 7-254 |
| Cow position: | chr18:3387207-3386958 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 7-268 |
| Cow position: | chr18:22055964-22055695 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 137, 34 |
| Conread position: | 7-277 |
| Cow position: | chr18:50974383-50974115 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 18 |
| Conread position: | 7-284 |
| Cow position: | chr18:36449807-36450083 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 213, 239 |
| Conread position: | 7-287 |
| Cow position: | chr18:42212356-42212630 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 213, 23 |
| Conread position: | 7-290 |
| Cow position: | chr18:55692724-55693006 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 34, 202 |
| Conread position: | 7-292 |
| Cow position: | chr18:9755987-9756275 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 213, 263 |
| Conread position: | 7-292 |
| Cow position: | chr18:43283846-43283568 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-294 |
| Cow position: | chr18:19868352-19868067 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 7-298 |
| Cow position: | chr18:17956470-17956181 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 7-299 |
| Cow position: | chr18:6005591-6005305 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 76, 162 |
| Conread position: | 8-180 |
| Cow position: | chr18:5711737-5711571 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 8-200 |
| Cow position: | chr18:27109382-27109193 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 8-249 |
| Cow position: | chr18:39001889-39001664 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 204, 23 |
| Conread position: | 8-272 |
| Cow position: | chr18:4926981-4927244 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 212, 13 |
| Conread position: | 8-274 |
| Cow position: | chr18:11907109-11907373 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 212, 17 |
| Conread position: | 8-288 |
| Cow position: | chr18:37023640-37023346 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 8-291 |
| Cow position: | chr18:4748970-4748698 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 260, 13 |
| Conread position: | 8-294 |
| Cow position: | chr18:16812063-16812348 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 212, 49 |
| Conread position: | 8-296 |
| Cow position: | chr18:12775873-12775582 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 212, 19 |
| Conread position: | 9-178 |
| Cow position: | chr18:52854964-52855135 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 9-179 |
| Cow position: | chr18:51656130-51655961 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 9-180 |
| Cow position: | chr18:7359658-7359827 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 9-201 |
| Cow position: | chr18:19896541-19896350 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 9-226 |
| Cow position: | chr18:5995381-5995598 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 209, 162 |
| Conread position: | 9-229 |
| Cow position: | chr18:48961847-48962069 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 9-247 |
| Cow position: | chr18:35663803-35664042 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 160, 16 |
| Conread position: | 9-249 |
| Cow position: | chr18:43950737-43950978 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 9-282 |
| Cow position: | chr18:21782606-21782864 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 9-308 |
| Cow position: | chr18:52472411-52472708 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 132 |
| Conread position: | 10-172 |
| Cow position: | chr18:25281977-25281817 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 10-270 |
| Cow position: | chr18:53795396-53795651 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 98 |
| Conread position: | 10-274 |
| Cow position: | chr18:1931541-1931287 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 208, 15 |
| Conread position: | 10-282 |
| Cow position: | chr18:5701163-5701447 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 170, 33 |
| Conread position: | 10-282 |
| Cow position: | chr18:37303059-37303333 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 57, 31 |
| Conread position: | 10-308 |
| Cow position: | chr18:52478064-52478354 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 11-198 |
| Cow position: | chr18:21380650-21380467 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 12-161 |
| Cow position: | chr18:2098827-2098681 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 12-169 |
| Cow position: | chr18:54111123-54111279 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 12-200 |
| Cow position: | chr18:21192498-21192313 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 12-233 |
| Cow position: | chr18:52413879-52414108 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 12-290 |
| Cow position: | chr18:12273574-12273836 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 211, 28 |
| Conread position: | 13-248 |
| Cow position: | chr18:4612368-4612604 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 210, 22 |
| Conread position: | 14-200 |
| Cow position: | chr18:28768282-28768469 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 120, 170 |
| Conread position: | 16-293 |
| Cow position: | chr18:6278557-6278274 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 106 |
| Conread position: | 18-201 |
| Cow position: | chr18:16997175-16997355 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 18-240 |
| Cow position: | chr18:36229761-36229531 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 19-246 |
| Cow position: | chr18:5600556-5600786 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 20-249 |
| Cow position: | chr18:5647736-5647958 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 200, 5 |
| Conread position: | 20-249 |
| Cow position: | chr18:11867262-11867488 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 20-301 |
| Cow position: | chr18:23169505-23169783 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 200, 5 |
| Conread position: | 21-246 |
| Cow position: | chr18:30225606-30225382 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 199, 10 |
| Conread position: | 21-273 |
| Cow position: | chr18:10051671-10051917 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 199, 47 |
| Conread position: | 22-218 |
| Cow position: | chr18:6330194-6330387 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 22-247 |
| Cow position: | chr18:17649814-17649591 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 186, 122 |
| Conread position: | 22-283 |
| Cow position: | chr18:51644094-51643833 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 106 |
| Conread position: | 22-290 |
| Cow position: | chr18:40281178-40280908 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 96, 226 |
| Conread position: | 23-249 |
| Cow position: | chr18:7965155-7965382 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 24-290 |
| Cow position: | chr18:13810280-13810552 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 24-293 |
| Cow position: | chr18:42290400-42290140 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 247, 17 |
| Conread position: | 26-210 |
| Cow position: | chr18:4649491-4649673 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 26-232 |
| Cow position: | chr18:7134212-7134414 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 109, 42 |
| Conread position: | 27-249 |
| Cow position: | chr18:31557233-31557007 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 27-249 |
| Cow position: | chr18:56183573-56183350 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 143, 7 |
| Conread position: | 28-199 |
| Cow position: | chr18:19787907-19788081 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 29-199 |
| Cow position: | chr18:24529938-24529771 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 29-284 |
| Cow position: | chr18:42427552-42427794 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 189, 17 |
| Conread position: | 30-271 |
| Cow position: | chr18:45558080-45558311 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 31-208 |
| Cow position: | chr18:24342776-24342954 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 31-233 |
| Cow position: | chr18:7481087-7481285 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 143, 13 |
| Conread position: | 32-230 |
| Cow position: | chr18:11754068-11754264 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 188, 12 |
| Conread position: | 32-246 |
| Cow position: | chr18:1544618-1544834 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 32-248 |
| Cow position: | chr18:1392638-1392420 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 33-178 |
| Cow position: | chr18:22170553-22170698 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-183 |
| Cow position: | chr18:2549367-2549218 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 33-184 |
| Cow position: | chr18:36746323-36746173 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 33-240 |
| Cow position: | chr18:7963717-7963922 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 33-249 |
| Cow position: | chr18:15517236-15517024 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 73 |
| Conread position: | 33-249 |
| Cow position: | chr18:36768876-36768666 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 33-274 |
| Cow position: | chr18:32599988-32600225 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 145, 8 |
| Conread position: | 33-281 |
| Cow position: | chr18:3180346-3180598 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 187, 151 |
| Conread position: | 33-286 |
| Cow position: | chr18:36355473-36355748 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 150 |
| Conread position: | 33-293 |
| Cow position: | chr18:42293119-42292868 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 238, 8 |
| Conread position: | 33-293 |
| Cow position: | chr18:52637594-52637332 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 187, 139 |
| Conread position: | 34-193 |
| Cow position: | chr18:46072399-46072558 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-246 |
| Cow position: | chr18:45622868-45622655 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 34-248 |
| Cow position: | chr18:55701728-55701512 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 34-249 |
| Cow position: | chr18:33158879-33159093 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 186, 42 |
| Conread position: | 34-249 |
| Cow position: | chr18:47548051-47547832 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 128 |
| Conread position: | 34-285 |
| Cow position: | chr18:17391057-17390809 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 168, 80 |
| Conread position: | 34-299 |
| Cow position: | chr18:25063898-25063635 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 137, 123 |
| Conread position: | 34-302 |
| Cow position: | chr18:4625824-4626084 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 234, 186 |
| Conread position: | 35-178 |
| Cow position: | chr18:47525344-47525488 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 35-178 |
| Cow position: | chr18:56191024-56190882 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 35-197 |
| Cow position: | chr18:6399695-6399540 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 35-201 |
| Cow position: | chr18:49324496-49324333 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 154, 64 |
| Conread position: | 35-209 |
| Cow position: | chr18:47835761-47835935 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 35-233 |
| Cow position: | chr18:47920677-47920883 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 35-246 |
| Cow position: | chr18:4628979-4629192 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 35-246 |
| Cow position: | chr18:7541940-7542155 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 35-248 |
| Cow position: | chr18:43823013-43822804 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 185, 71 |
| Conread position: | 35-249 |
| Cow position: | chr18:35889158-35888938 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 135, 41 |
| Conread position: | 35-249 |
| Cow position: | chr18:38601948-38601735 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 132 |
| Conread position: | 35-249 |
| Cow position: | chr18:52649410-52649189 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 35-250 |
| Cow position: | chr18:247752-247546 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 35-250 |
| Cow position: | chr18:7966179-7966395 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 185, 197 |
| Conread position: | 35-268 |
| Cow position: | chr18:18843951-18844181 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 35-270 |
| Cow position: | chr18:9974391-9974158 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 188, 127 |
| Conread position: | 35-270 |
| Cow position: | chr18:19765126-19765356 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 35-272 |
| Cow position: | chr18:27078805-27079036 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 185, 65 |
| Conread position: | 35-273 |
| Cow position: | chr18:56155458-56155686 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 185, 45 |
| Conread position: | 35-274 |
| Cow position: | chr18:50359269-50359496 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 185, 145 |
| Conread position: | 35-293 |
| Cow position: | chr18:9029547-9029808 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 36-178 |
| Cow position: | chr18:47693004-47693146 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-248 |
| Cow position: | chr18:17368641-17368428 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 184, 124 |
| Conread position: | 36-248 |
| Cow position: | chr18:19629067-19628853 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 36-248 |
| Cow position: | chr18:54513055-54513267 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 184, 8 |
| Conread position: | 36-272 |
| Cow position: | chr18:24719251-24719479 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 184, 146 |
| Conread position: | 36-277 |
| Cow position: | chr18:16659494-16659254 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 137, 218 |
| Conread position: | 36-277 |
| Cow position: | chr18:31082410-31082165 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 135, 235 |
| Conread position: | 36-281 |
| Cow position: | chr18:135715-135482 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 184, 8 |
| Conread position: | 36-290 |
| Cow position: | chr18:20283201-20283456 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 184, 108 |
| Conread position: | 36-302 |
| Cow position: | chr18:44908991-44909256 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 184, 153 |
| Conread position: | 36-315 |
| Cow position: | chr18:51827219-51827491 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 184, 88 |
| Conread position: | 37-170 |
| Cow position: | chr18:380872-381004 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 37-228 |
| Cow position: | chr18:6818725-6818532 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 81, 108 |
| Conread position: | 37-249 |
| Cow position: | chr18:31672572-31672368 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 183, 22 |
| Conread position: | 37-271 |
| Cow position: | chr18:38937761-38937991 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 183, 31 |
| Conread position: | 37-290 |
| Cow position: | chr18:14586531-14586293 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 181, 150 |
| Conread position: | 38-195 |
| Cow position: | chr18:46647216-46647063 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 39-195 |
| Cow position: | chr18:4203988-4203833 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 5, 70 |
| Conread position: | 39-257 |
| Cow position: | chr18:49655626-49655839 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 107 |
| Conread position: | 39-296 |
| Cow position: | chr18:46880764-46880512 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 181, 119 |
| Conread position: | 40-246 |
| Cow position: | chr18:38363416-38363623 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 180, 23 |
| Conread position: | 40-246 |
| Cow position: | chr18:48113022-48112819 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 40-248 |
| Cow position: | chr18:51192798-51192599 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 178, 142 |
| Conread position: | 40-249 |
| Cow position: | chr18:2773450-2773237 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 40-249 |
| Cow position: | chr18:2776953-2776740 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 40-254 |
| Cow position: | chr18:23447119-23446904 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 180, 142 |
| Conread position: | 40-264 |
| Cow position: | chr18:40047556-40047338 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 180, 83 |
| Conread position: | 40-269 |
| Cow position: | chr18:11233358-11233587 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 134, 27 |
| Conread position: | 40-270 |
| Cow position: | chr18:52251915-52251687 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 213 |
| Conread position: | 40-272 |
| Cow position: | chr18:20641554-20641327 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 211, 142 |
| Conread position: | 40-272 |
| Cow position: | chr18:23941681-23941447 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 40-279 |
| Cow position: | chr18:23653181-23652937 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 49, 186 |
| Conread position: | 40-287 |
| Cow position: | chr18:4495944-4495706 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 183, 146 |
| Conread position: | 40-313 |
| Cow position: | chr18:10322748-10323010 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 177, 140 |
| Conread position: | 41-235 |
| Cow position: | chr18:35827430-35827239 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 179, 65 |
| Conread position: | 41-252 |
| Cow position: | chr18:15613917-15613711 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 65 |
| Conread position: | 41-271 |
| Cow position: | chr18:46880226-46879992 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 218 |
| Conread position: | 41-285 |
| Cow position: | chr18:38211104-38211340 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 182, 65 |
| Conread position: | 45-273 |
| Cow position: | chr18:14172260-14172043 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 173, 55 |
| Conread position: | 46-271 |
| Cow position: | chr18:19640920-19641142 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 64, 60 |
| Conread position: | 48-246 |
| Cow position: | chr18:55733756-55733559 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 50-272 |
| Cow position: | chr18:44917709-44917929 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 201, 132 |
| Conread position: | 51-245 |
| Cow position: | chr18:15861188-15861382 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 169, 42 |
| Conread position: | 51-249 |
| Cow position: | chr18:11657610-11657809 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 163, 65 |
| Conread position: | 51-282 |
| Cow position: | chr18:30360198-30359959 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 51-292 |
| Cow position: | chr18:47485997-47486236 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 52-249 |
| Cow position: | chr18:39168486-39168680 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 37 |
| Conread position: | 52-249 |
| Cow position: | chr18:46048706-46048904 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 167, 132 |
| Conread position: | 54-293 |
| Cow position: | chr18:19796967-19796730 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 202 |
| Conread position: | 55-287 |
| Cow position: | chr18:53093061-53092820 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 56-290 |
| Cow position: | chr18:23648880-23649113 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 125, 198 |
| Conread position: | 57-177 |
| Cow position: | chr18:45985666-45985546 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-210 |
| Cow position: | chr18:29080766-29080919 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-243 |
| Cow position: | chr18:19157833-19158021 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 114, 104 |
| Conread position: | 57-283 |
| Cow position: | chr18:50566860-50567089 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 57-287 |
| Cow position: | chr18:37188038-37187811 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 166, 188 |
| Conread position: | 60-290 |
| Cow position: | chr18:238153-237927 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 158, 9 |
| Conread position: | 62-237 |
| Cow position: | chr18:14576992-14577169 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 63-246 |
| Cow position: | chr18:39147997-39147812 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 157, 170 |
| Conread position: | 64-249 |
| Cow position: | chr18:49603078-49602892 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 119 |
| Conread position: | 65-283 |
| Cow position: | chr18:23810153-23809941 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 158, 173 |
| Conread position: | 65-283 |
| Cow position: | chr18:33756988-33757194 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 79, 27 |
| Conread position: | 65-290 |
| Cow position: | chr18:21751342-21751567 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 67-235 |
| Cow position: | chr18:23821863-23821693 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 68-196 |
| Cow position: | chr18:49982700-49982828 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-248 |
| Cow position: | chr18:34490250-34490430 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 68-249 |
| Cow position: | chr18:19809712-19809533 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 150, 119 |
| Conread position: | 68-271 |
| Cow position: | chr18:20998446-20998242 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 68-281 |
| Cow position: | chr18:35795252-35795042 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 155, 99 |
| Conread position: | 68-283 |
| Cow position: | chr18:49970683-49970471 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 150, 168 |
| Conread position: | 69-245 |
| Cow position: | chr18:45185843-45186021 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 69-249 |
| Cow position: | chr18:39460191-39460366 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 149, 117 |
| Conread position: | 70-278 |
| Cow position: | chr18:4489936-4489725 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 122, 187 |
| Conread position: | 71-235 |
| Cow position: | chr18:22328116-22328282 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 71-294 |
| Cow position: | chr18:2108220-2108438 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 124, 96 |
| Conread position: | 72-271 |
| Cow position: | chr18:8208451-8208255 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 150, 108 |
| Conread position: | 72-318 |
| Cow position: | chr18:56463756-56463499 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 148, 54 |
| Conread position: | 72-351 |
| Cow position: | chr18:41702811-41703081 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 148, 28 |
| Conread position: | 73-235 |
| Cow position: | chr18:4718234-4718398 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 73-252 |
| Cow position: | chr18:697242-697066 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 147, 54 |
| Conread position: | 74-239 |
| Cow position: | chr18:31969-32134 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 146, 5 |
| Conread position: | 74-246 |
| Cow position: | chr18:46985594-46985420 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 75-249 |
| Cow position: | chr18:24022595-24022765 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 145, 122 |
| Conread position: | 75-299 |
| Cow position: | chr18:29188363-29188590 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 177 |
| Conread position: | 76-248 |
| Cow position: | chr18:14871631-14871455 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 76-249 |
| Cow position: | chr18:26586636-26586462 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 144, 92 |
| Conread position: | 76-272 |
| Cow position: | chr18:45573358-45573550 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 144, 121 |
| Conread position: | 76-277 |
| Cow position: | chr18:39710086-39710289 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 97, 16 |
| Conread position: | 76-286 |
| Cow position: | chr18:50004724-50004518 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 144, 24 |
| Conread position: | 80-235 |
| Cow position: | chr18:49281081-49280924 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 80-282 |
| Cow position: | chr18:5189709-5189513 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 8 |
| Conread position: | 81-270 |
| Cow position: | chr18:35950018-35950212 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 52, 170 |
| Conread position: | 82-296 |
| Cow position: | chr18:17195361-17195148 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 135, 92 |
| Conread position: | 84-249 |
| Cow position: | chr18:27637478-27637642 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 155 |
| Conread position: | 85-288 |
| Cow position: | chr18:16381845-16382046 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 168 |
| Conread position: | 86-274 |
| Cow position: | chr18:52387232-52387047 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 134, 116 |
| Conread position: | 86-299 |
| Cow position: | chr18:4000334-4000546 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 161 |
| Conread position: | 92-287 |
| Cow position: | chr18:47175387-47175194 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 120, 38 |
| Conread position: | 94-281 |
| Cow position: | chr18:49440837-49441024 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 89 |
| Conread position: | 94-293 |
| Cow position: | chr18:22045417-22045218 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 94-300 |
| Cow position: | chr18:21528643-21528844 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 99-264 |
| Cow position: | chr18:15351729-15351562 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 142 |
| Conread position: | 100-270 |
| Cow position: | chr18:3412363-3412531 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 102-250 |
| Cow position: | chr18:41253544-41253694 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 107-294 |
| Cow position: | chr18:44514095-44514281 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 65, 147 |
| Conread position: | 108-249 |
| Cow position: | chr18:10668343-10668485 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 120 |
| Conread position: | 112-296 |
| Cow position: | chr18:37690164-37690345 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 108, 67 |
| Conread position: | 116-283 |
| Cow position: | chr18:35171366-35171529 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 106, 130 |
| Conread position: | 116-290 |
| Cow position: | chr18:10758037-10757874 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 133-300 |
| Cow position: | chr18:1531041-1530874 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 128 |
Show alignments to all cow chromosomes.