Cow genome map
| Conread name: | Tra1-TCH01E040033 |
| Conread position: | 3-167 |
| Cow position: | chr21:23460144-23460299 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-180 |
| Cow position: | chr21:10001079-10001254 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 3-245 |
| Cow position: | chr21:829208-828967 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 4-142 |
| Cow position: | chr21:34390970-34390834 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 4-156 |
| Cow position: | chr21:10089987-10089837 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 4-163 |
| Cow position: | chr21:33729435-33729592 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-167 |
| Cow position: | chr21:36789796-36789962 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-170 |
| Cow position: | chr21:12104369-12104535 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 4-175 |
| Cow position: | chr21:37345092-37344927 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 4-176 |
| Cow position: | chr21:1591557-1591722 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 4-176 |
| Cow position: | chr21:42414096-42413922 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 4-177 |
| Cow position: | chr21:45921053-45920883 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 4-178 |
| Cow position: | chr21:27229789-27229618 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 4-178 |
| Cow position: | chr21:30607084-30606919 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 4-180 |
| Cow position: | chr21:395875-396046 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-181 |
| Cow position: | chr21:28429448-28429624 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 4-191 |
| Cow position: | chr21:15976638-15976822 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 4-196 |
| Cow position: | chr21:4399808-4399996 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 4-196 |
| Cow position: | chr21:10538247-10538060 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-196 |
| Cow position: | chr21:28924115-28924305 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 172, 27 |
| Conread position: | 4-198 |
| Cow position: | chr21:29484984-29485175 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 4-200 |
| Cow position: | chr21:10633635-10633444 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 4-200 |
| Cow position: | chr21:24642525-24642709 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 4-200 |
| Cow position: | chr21:26244923-26245113 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 4-200 |
| Cow position: | chr21:29978755-29978560 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 183, 31 |
| Conread position: | 4-200 |
| Cow position: | chr21:33563015-33563202 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-200 |
| Cow position: | chr21:42384515-42384708 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 170, 27 |
| Conread position: | 4-201 |
| Cow position: | chr21:3400829-3400632 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 4-201 |
| Cow position: | chr21:5392533-5392337 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 87, 167 |
| Conread position: | 4-201 |
| Cow position: | chr21:7581897-7581705 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-201 |
| Cow position: | chr21:23322073-23321878 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 4-210 |
| Cow position: | chr21:31159408-31159604 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 4-218 |
| Cow position: | chr21:9990515-9990725 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 4-226 |
| Cow position: | chr21:28599894-28600105 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 4-228 |
| Cow position: | chr21:47764110-47763891 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-229 |
| Cow position: | chr21:36795605-36795830 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 4-232 |
| Cow position: | chr21:25628905-25628684 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 195, 29 |
| Conread position: | 4-234 |
| Cow position: | chr21:42097074-42097314 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 4-235 |
| Cow position: | chr21:7377922-7377690 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 216, 30 |
| Conread position: | 4-240 |
| Cow position: | chr21:28733909-28733673 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 203, 77 |
| Conread position: | 4-246 |
| Cow position: | chr21:32339732-32339501 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 4-247 |
| Cow position: | chr21:33726-33978 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 182, 23 |
| Conread position: | 4-248 |
| Cow position: | chr21:13035039-13034789 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-248 |
| Cow position: | chr21:16604313-16604068 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 216, 21 |
| Conread position: | 4-249 |
| Cow position: | chr21:47043-47294 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 4-249 |
| Cow position: | chr21:71590-71833 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 216, 139 |
| Conread position: | 4-249 |
| Cow position: | chr21:957677-957916 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 216, 30 |
| Conread position: | 4-249 |
| Cow position: | chr21:7394387-7394616 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 4-249 |
| Cow position: | chr21:12739084-12739335 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 184, 30 |
| Conread position: | 4-249 |
| Cow position: | chr21:14760577-14760804 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 4-249 |
| Cow position: | chr21:17193748-17193501 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 117, 172 |
| Conread position: | 4-249 |
| Cow position: | chr21:18568635-18568390 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 216, 41 |
| Conread position: | 4-249 |
| Cow position: | chr21:22210239-22209996 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 178, 27 |
| Conread position: | 4-249 |
| Cow position: | chr21:27863511-27863272 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 158 |
| Conread position: | 4-249 |
| Cow position: | chr21:28919519-28919284 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 216, 30 |
| Conread position: | 4-249 |
| Cow position: | chr21:29069324-29069076 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 4-249 |
| Cow position: | chr21:30835368-30835613 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 4-249 |
| Cow position: | chr21:34151589-34151823 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 213, 97 |
| Conread position: | 4-249 |
| Cow position: | chr21:41287790-41287549 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 214, 178 |
| Conread position: | 4-249 |
| Cow position: | chr21:42135615-42135372 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 4-249 |
| Cow position: | chr21:47714000-47713760 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 183, 37 |
| Conread position: | 4-250 |
| Cow position: | chr21:643329-643568 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 4-252 |
| Cow position: | chr21:24858318-24858566 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 219, 197 |
| Conread position: | 4-255 |
| Cow position: | chr21:10410225-10410476 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 4-269 |
| Cow position: | chr21:6713521-6713255 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 4-270 |
| Cow position: | chr21:641591-641848 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 216, 27 |
| Conread position: | 4-270 |
| Cow position: | chr21:12154138-12154389 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 4-270 |
| Cow position: | chr21:33982801-33982545 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 175, 29 |
| Conread position: | 4-270 |
| Cow position: | chr21:36508246-36508500 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 216, 21 |
| Conread position: | 4-270 |
| Cow position: | chr21:42501044-42501316 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 185 |
| Conread position: | 4-271 |
| Cow position: | chr21:10004882-10004618 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 102 |
| Conread position: | 4-272 |
| Cow position: | chr21:37299463-37299729 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 215 |
| Conread position: | 4-272 |
| Cow position: | chr21:38918208-38918468 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 4-273 |
| Cow position: | chr21:13585049-13584785 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 165, 26 |
| Conread position: | 4-274 |
| Cow position: | chr21:8426451-8426711 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 214, 29 |
| Conread position: | 4-275 |
| Cow position: | chr21:30592302-30592045 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 4-278 |
| Cow position: | chr21:15445068-15444810 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 216, 48 |
| Conread position: | 4-283 |
| Cow position: | chr21:10147996-10148276 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 4-283 |
| Cow position: | chr21:17890308-17890579 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 21 |
| Conread position: | 4-283 |
| Cow position: | chr21:28030293-28030558 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 107, 37 |
| Conread position: | 4-283 |
| Cow position: | chr21:41155867-41156148 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 204 |
| Conread position: | 4-284 |
| Cow position: | chr21:10264037-10264312 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 28 |
| Conread position: | 4-286 |
| Cow position: | chr21:11027348-11027079 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 208, 27 |
| Conread position: | 4-286 |
| Cow position: | chr21:23980175-23979899 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 113, 21 |
| Conread position: | 4-286 |
| Cow position: | chr21:36696085-36695810 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 216, 27 |
| Conread position: | 4-286 |
| Cow position: | chr21:41621129-41621406 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 37 |
| Conread position: | 4-287 |
| Cow position: | chr21:6834055-6834331 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 214, 29 |
| Conread position: | 4-288 |
| Cow position: | chr21:41590561-41590286 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 4-290 |
| Cow position: | chr21:13588767-13589047 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 4-290 |
| Cow position: | chr21:22718779-22718500 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 4-290 |
| Cow position: | chr21:36910745-36911019 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 4-291 |
| Cow position: | chr21:20152959-20153242 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 150 |
| Conread position: | 4-293 |
| Cow position: | chr21:13048190-13047898 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 4-293 |
| Cow position: | chr21:13656630-13656347 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 216, 20 |
| Conread position: | 4-293 |
| Cow position: | chr21:32559356-32559080 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 216, 16 |
| Conread position: | 4-294 |
| Cow position: | chr21:47719302-47719017 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 129 |
| Conread position: | 4-296 |
| Cow position: | chr21:7768439-7768715 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 180 |
| Conread position: | 4-297 |
| Cow position: | chr21:47363733-47363432 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 77, 261 |
| Conread position: | 4-299 |
| Cow position: | chr21:8431097-8430803 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 4-301 |
| Cow position: | chr21:15584415-15584126 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 219, 29 |
| Conread position: | 4-339 |
| Cow position: | chr21:44724360-44724044 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 216, 27 |
| Conread position: | 5-152 |
| Cow position: | chr21:42540218-42540071 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-170 |
| Cow position: | chr21:38121105-38121270 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-200 |
| Cow position: | chr21:33350746-33350940 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 5-275 |
| Cow position: | chr21:11740115-11739847 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 6-273 |
| Cow position: | chr21:30222350-30222609 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 212, 176 |
| Conread position: | 7-163 |
| Cow position: | chr21:14441843-14441999 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-186 |
| Cow position: | chr21:17008988-17009165 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 7-198 |
| Cow position: | chr21:2657816-2658006 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 7-199 |
| Cow position: | chr21:40168619-40168428 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 7-201 |
| Cow position: | chr21:44825883-44825685 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 7-218 |
| Cow position: | chr21:21169484-21169279 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 7-235 |
| Cow position: | chr21:10007632-10007404 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 211, 18 |
| Conread position: | 7-246 |
| Cow position: | chr21:10883916-10883674 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 7-246 |
| Cow position: | chr21:12559705-12559949 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 7-246 |
| Cow position: | chr21:18155559-18155320 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 213, 18 |
| Conread position: | 7-248 |
| Cow position: | chr21:6317672-6317439 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 216, 24 |
| Conread position: | 7-248 |
| Cow position: | chr21:10406926-10406682 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 167, 103 |
| Conread position: | 7-248 |
| Cow position: | chr21:19561559-19561318 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 7-248 |
| Cow position: | chr21:39319406-39319160 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 7-248 |
| Cow position: | chr21:40589477-40589234 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 7-249 |
| Cow position: | chr21:6997948-6998188 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 7-249 |
| Cow position: | chr21:11644962-11644719 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 175 |
| Conread position: | 7-249 |
| Cow position: | chr21:28237704-28237452 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 7-249 |
| Cow position: | chr21:45971163-45970932 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-271 |
| Cow position: | chr21:28244477-28244732 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 213, 73 |
| Conread position: | 7-276 |
| Cow position: | chr21:29014905-29014647 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 7-282 |
| Cow position: | chr21:17982983-17983247 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 7-282 |
| Cow position: | chr21:40134168-40134422 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 216, 18 |
| Conread position: | 7-290 |
| Cow position: | chr21:44251835-44251556 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 211, 14 |
| Conread position: | 7-296 |
| Cow position: | chr21:41617732-41617449 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 210, 18 |
| Conread position: | 8-200 |
| Cow position: | chr21:734605-734788 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 8-235 |
| Cow position: | chr21:44962803-44963032 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 8-249 |
| Cow position: | chr21:20160687-20160925 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 212, 23 |
| Conread position: | 8-270 |
| Cow position: | chr21:21907420-21907177 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 212, 33 |
| Conread position: | 8-283 |
| Cow position: | chr21:33580430-33580688 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-290 |
| Cow position: | chr21:22856229-22856509 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 212, 17 |
| Conread position: | 8-291 |
| Cow position: | chr21:27521323-27521051 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 210, 27 |
| Conread position: | 8-296 |
| Cow position: | chr21:17183932-17184212 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 212, 25 |
| Conread position: | 8-299 |
| Cow position: | chr21:25127611-25127906 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 9-185 |
| Cow position: | chr21:7583856-7584034 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 9-200 |
| Cow position: | chr21:19360167-19359977 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 9-217 |
| Cow position: | chr21:42007453-42007246 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 9-227 |
| Cow position: | chr21:13089460-13089240 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 179, 91 |
| Conread position: | 9-228 |
| Cow position: | chr21:17642974-17642763 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 211, 25 |
| Conread position: | 9-248 |
| Cow position: | chr21:3361004-3360770 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 9-287 |
| Cow position: | chr21:13840335-13840617 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 211, 114 |
| Conread position: | 10-202 |
| Cow position: | chr21:19673816-19674007 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 10-228 |
| Cow position: | chr21:19258835-19259042 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 192, 23 |
| Conread position: | 10-249 |
| Cow position: | chr21:868915-868672 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 10-249 |
| Cow position: | chr21:8546007-8545773 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 210, 25 |
| Conread position: | 10-261 |
| Cow position: | chr21:13889636-13889394 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 210, 31 |
| Conread position: | 10-270 |
| Cow position: | chr21:3585357-3585100 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 179, 22 |
| Conread position: | 10-270 |
| Cow position: | chr21:42841589-42841321 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 250 |
| Conread position: | 10-273 |
| Cow position: | chr21:9311056-9311325 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 10-274 |
| Cow position: | chr21:16793800-16794065 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 10-274 |
| Cow position: | chr21:24296755-24296497 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 10-275 |
| Cow position: | chr21:41140706-41140446 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 210, 23 |
| Conread position: | 10-287 |
| Cow position: | chr21:2260351-2260067 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 11-179 |
| Cow position: | chr21:27341581-27341417 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 11-235 |
| Cow position: | chr21:6624170-6624392 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 207, 14 |
| Conread position: | 11-238 |
| Cow position: | chr21:39664388-39664159 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 11-249 |
| Cow position: | chr21:47465109-47464872 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 117 |
| Conread position: | 11-252 |
| Cow position: | chr21:1511304-1511536 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 211, 23 |
| Conread position: | 11-274 |
| Cow position: | chr21:5898389-5898136 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 211, 21 |
| Conread position: | 11-276 |
| Cow position: | chr21:23568231-23568495 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 178 |
| Conread position: | 11-285 |
| Cow position: | chr21:14452246-14452511 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 11-287 |
| Cow position: | chr21:4281861-4281597 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 240, 24 |
| Conread position: | 11-302 |
| Cow position: | chr21:30231684-30231401 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 209, 130 |
| Conread position: | 12-282 |
| Cow position: | chr21:27569158-27568883 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 18-271 |
| Cow position: | chr21:18059943-18059694 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 18-272 |
| Cow position: | chr21:17511795-17512040 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 18-293 |
| Cow position: | chr21:17559910-17559629 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 20-200 |
| Cow position: | chr21:26567759-26567578 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 21-248 |
| Cow position: | chr21:40899359-40899587 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 199, 190 |
| Conread position: | 21-286 |
| Cow position: | chr21:19624425-19624685 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 97, 14 |
| Conread position: | 22-247 |
| Cow position: | chr21:41198377-41198152 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 198, 13 |
| Conread position: | 22-250 |
| Cow position: | chr21:2292978-2292749 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 13 |
| Conread position: | 23-283 |
| Cow position: | chr21:37835600-37835863 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 99 |
| Conread position: | 24-293 |
| Cow position: | chr21:27145969-27145696 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 140, 111 |
| Conread position: | 25-206 |
| Cow position: | chr21:34475086-34475264 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 25-242 |
| Cow position: | chr21:8241938-8242155 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 195, 6 |
| Conread position: | 25-245 |
| Cow position: | chr21:11174263-11174487 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 25-276 |
| Cow position: | chr21:23535735-23535983 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 40 |
| Conread position: | 26-235 |
| Cow position: | chr21:49276159-49276370 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 26-300 |
| Cow position: | chr21:10423133-10423410 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 192, 156 |
| Conread position: | 28-198 |
| Cow position: | chr21:11057851-11057684 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 31-200 |
| Cow position: | chr21:17265971-17265801 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 133 |
| Conread position: | 32-166 |
| Cow position: | chr21:8231646-8231513 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 32-196 |
| Cow position: | chr21:8213246-8213086 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 32-198 |
| Cow position: | chr21:36682356-36682522 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-264 |
| Cow position: | chr21:12366402-12366636 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 188, 125 |
| Conread position: | 32-290 |
| Cow position: | chr21:36023159-36022901 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 188, 212 |
| Conread position: | 32-294 |
| Cow position: | chr21:46612762-46612515 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 188, 12 |
| Conread position: | 32-299 |
| Cow position: | chr21:18471609-18471866 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 188, 46 |
| Conread position: | 32-310 |
| Cow position: | chr21:27677513-27677787 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 33-237 |
| Cow position: | chr21:6017656-6017862 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 33-249 |
| Cow position: | chr21:18493340-18493119 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 143 |
| Conread position: | 33-286 |
| Cow position: | chr21:19083567-19083305 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 137 |
| Conread position: | 33-293 |
| Cow position: | chr21:43692848-43693103 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 82, 188 |
| Conread position: | 33-294 |
| Cow position: | chr21:37838034-37837790 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 34-183 |
| Cow position: | chr21:27081079-27081226 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 130, 67 |
| Conread position: | 34-193 |
| Cow position: | chr21:34210046-34209889 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 34-196 |
| Cow position: | chr21:20318546-20318705 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 34-196 |
| Cow position: | chr21:41597844-41598006 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-198 |
| Cow position: | chr21:802284-802120 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-200 |
| Cow position: | chr21:13163892-13164058 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-270 |
| Cow position: | chr21:15271414-15271175 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 156 |
| Conread position: | 34-282 |
| Cow position: | chr21:24797690-24797928 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 184, 79 |
| Conread position: | 34-287 |
| Cow position: | chr21:32297486-32297221 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 34-289 |
| Cow position: | chr21:9278557-9278816 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 34-289 |
| Cow position: | chr21:41610199-41610460 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 7, 231 |
| Conread position: | 35-201 |
| Cow position: | chr21:30119728-30119894 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-210 |
| Cow position: | chr21:19766889-19767063 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 136, 9 |
| Conread position: | 35-234 |
| Cow position: | chr21:36177193-36177391 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 184, 172 |
| Conread position: | 35-235 |
| Cow position: | chr21:23573371-23573570 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 185, 140 |
| Conread position: | 35-247 |
| Cow position: | chr21:11755731-11755519 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 122, 154 |
| Conread position: | 35-247 |
| Cow position: | chr21:13944081-13943872 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 35-248 |
| Cow position: | chr21:10858842-10859056 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 185, 66 |
| Conread position: | 35-248 |
| Cow position: | chr21:17252944-17252731 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 185, 60 |
| Conread position: | 35-248 |
| Cow position: | chr21:17637926-17638141 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 35-249 |
| Cow position: | chr21:16083084-16082865 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 35-249 |
| Cow position: | chr21:24266531-24266314 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 140, 27 |
| Conread position: | 35-252 |
| Cow position: | chr21:25344895-25345114 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 35-252 |
| Cow position: | chr21:40475534-40475751 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 185, 10 |
| Conread position: | 35-271 |
| Cow position: | chr21:3763708-3763486 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 185, 92 |
| Conread position: | 35-272 |
| Cow position: | chr21:37706381-37706145 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 141, 148 |
| Conread position: | 35-276 |
| Cow position: | chr21:46809737-46809495 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 182 |
| Conread position: | 35-281 |
| Cow position: | chr21:44592175-44591927 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 139, 168 |
| Conread position: | 35-287 |
| Cow position: | chr21:14464613-14464870 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 222 |
| Conread position: | 35-293 |
| Cow position: | chr21:28027831-28028092 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 185, 45 |
| Conread position: | 36-180 |
| Cow position: | chr21:25383059-25383205 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-235 |
| Cow position: | chr21:35084562-35084361 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 126, 137 |
| Conread position: | 36-270 |
| Cow position: | chr21:42144861-42145083 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 36-275 |
| Cow position: | chr21:36763097-36763337 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 36-291 |
| Cow position: | chr21:20163743-20163995 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 187, 139 |
| Conread position: | 36-291 |
| Cow position: | chr21:31760178-31759940 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 191, 54 |
| Conread position: | 36-299 |
| Cow position: | chr21:12310512-12310764 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 36-303 |
| Cow position: | chr21:27669048-27669311 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 70 |
| Conread position: | 36-326 |
| Cow position: | chr21:16914806-16915095 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 8, 224 |
| Conread position: | 37-246 |
| Cow position: | chr21:17515843-17516054 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 37-248 |
| Cow position: | chr21:17519057-17519274 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 37-249 |
| Cow position: | chr21:6051539-6051752 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 183, 143 |
| Conread position: | 37-264 |
| Cow position: | chr21:11353098-11353322 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 37-270 |
| Cow position: | chr21:9504902-9505133 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 137, 75 |
| Conread position: | 37-271 |
| Cow position: | chr21:31279292-31279518 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 183, 137 |
| Conread position: | 37-283 |
| Cow position: | chr21:10980394-10980640 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 178, 86 |
| Conread position: | 37-298 |
| Cow position: | chr21:20213741-20213481 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 140, 219 |
| Conread position: | 39-282 |
| Cow position: | chr21:1562505-1562254 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 9, 215 |
| Conread position: | 40-185 |
| Cow position: | chr21:38440298-38440443 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-193 |
| Cow position: | chr21:30980538-30980386 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 40-197 |
| Cow position: | chr21:712981-713139 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 40-235 |
| Cow position: | chr21:28191395-28191582 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 180, 81 |
| Conread position: | 40-272 |
| Cow position: | chr21:40291707-40291482 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 180, 50 |
| Conread position: | 41-185 |
| Cow position: | chr21:6758384-6758527 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 41-249 |
| Cow position: | chr21:32393017-32392815 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 135, 65 |
| Conread position: | 41-249 |
| Cow position: | chr21:38900814-38901010 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 43-170 |
| Cow position: | chr21:7221298-7221171 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-276 |
| Cow position: | chr21:11779494-11779262 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 138, 34 |
| Conread position: | 43-290 |
| Cow position: | chr21:938063-938303 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 177, 29 |
| Conread position: | 44-231 |
| Cow position: | chr21:6736146-6735964 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 176, 136 |
| Conread position: | 44-281 |
| Cow position: | chr21:13225758-13225992 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 201 |
| Conread position: | 44-286 |
| Cow position: | chr21:30938629-30938383 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 43, 160 |
| Conread position: | 46-170 |
| Cow position: | chr21:35647783-35647659 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-249 |
| Cow position: | chr21:8924410-8924618 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 47-291 |
| Cow position: | chr21:44829713-44829472 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 173, 206 |
| Conread position: | 48-250 |
| Cow position: | chr21:27712196-27711986 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 49-283 |
| Cow position: | chr21:18721057-18720822 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 171, 23 |
| Conread position: | 51-195 |
| Cow position: | chr21:8978499-8978641 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 51-238 |
| Cow position: | chr21:3177891-3178084 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 51-249 |
| Cow position: | chr21:37928699-37928898 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 172, 184 |
| Conread position: | 51-273 |
| Cow position: | chr21:3415704-3415925 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 169, 124 |
| Conread position: | 52-247 |
| Cow position: | chr21:14360416-14360613 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 52-287 |
| Cow position: | chr21:82118-82337 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 53-310 |
| Cow position: | chr21:40820801-40820545 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 165, 103 |
| Conread position: | 54-189 |
| Cow position: | chr21:8687090-8686955 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-242 |
| Cow position: | chr21:8497553-8497363 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 54-248 |
| Cow position: | chr21:12541346-12541151 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 166, 62 |
| Conread position: | 55-288 |
| Cow position: | chr21:49699986-49699755 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 163, 202 |
| Conread position: | 56-260 |
| Cow position: | chr21:42355684-42355899 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 57-240 |
| Cow position: | chr21:6153857-6154041 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 163, 35 |
| Conread position: | 57-249 |
| Cow position: | chr21:19161768-19161962 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 49 |
| Conread position: | 57-285 |
| Cow position: | chr21:31659091-31658875 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 161, 43 |
| Conread position: | 58-274 |
| Cow position: | chr21:41482916-41482705 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 162, 22 |
| Conread position: | 60-281 |
| Cow position: | chr21:48482469-48482257 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 160, 30 |
| Conread position: | 64-299 |
| Cow position: | chr21:27409669-27409441 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 154, 85 |
| Conread position: | 65-283 |
| Cow position: | chr21:26828907-26828689 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 155, 35 |
| Conread position: | 65-294 |
| Cow position: | chr21:28882244-28882469 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 65-295 |
| Cow position: | chr21:22211317-22211545 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 155, 181 |
| Conread position: | 66-199 |
| Cow position: | chr21:42131290-42131157 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-248 |
| Cow position: | chr21:6291811-6291995 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 66-249 |
| Cow position: | chr21:45651395-45651214 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 67-290 |
| Cow position: | chr21:646247-646027 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 25 |
| Conread position: | 68-270 |
| Cow position: | chr21:29418639-29418837 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 26 |
| Conread position: | 68-287 |
| Cow position: | chr21:21940340-21940129 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 200, 107 |
| Conread position: | 68-290 |
| Cow position: | chr21:38482450-38482670 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 24 |
| Conread position: | 70-248 |
| Cow position: | chr21:17302572-17302752 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 70-249 |
| Cow position: | chr21:42017534-42017354 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 70-276 |
| Cow position: | chr21:42189688-42189490 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 71-233 |
| Cow position: | chr21:15869760-15869918 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 149, 116 |
| Conread position: | 71-272 |
| Cow position: | chr21:11099901-11099704 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 72-249 |
| Cow position: | chr21:4108846-4109024 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 148, 136 |
| Conread position: | 72-264 |
| Cow position: | chr21:5214419-5214614 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 72-310 |
| Cow position: | chr21:8986093-8986335 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 113, 24 |
| Conread position: | 73-246 |
| Cow position: | chr21:874393-874568 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 73-249 |
| Cow position: | chr21:14745841-14746019 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 73-279 |
| Cow position: | chr21:10587415-10587204 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 74-281 |
| Cow position: | chr21:32648116-32647911 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 144, 179 |
| Conread position: | 76-285 |
| Cow position: | chr21:20193045-20193256 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 144, 193 |
| Conread position: | 76-297 |
| Cow position: | chr21:24350927-24351144 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 77-248 |
| Cow position: | chr21:19826294-19826467 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 77-287 |
| Cow position: | chr21:15305223-15305014 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 129, 177 |
| Conread position: | 78-330 |
| Cow position: | chr21:24757018-24757263 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 80-249 |
| Cow position: | chr21:30970014-30970182 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 142, 100 |
| Conread position: | 81-270 |
| Cow position: | chr21:41737988-41738172 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 81-297 |
| Cow position: | chr21:11006691-11006476 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 82-249 |
| Cow position: | chr21:16796932-16797099 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 92, 158 |
| Conread position: | 83-257 |
| Cow position: | chr21:42343783-42343955 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 86-288 |
| Cow position: | chr21:31278268-31278471 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 97-270 |
| Cow position: | chr21:45537280-45537454 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 153 |
| Conread position: | 101-235 |
| Cow position: | chr21:42905298-42905162 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 101-276 |
| Cow position: | chr21:6041884-6042064 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 107-272 |
| Cow position: | chr21:7424908-7424740 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 97 |
| Conread position: | 107-272 |
| Cow position: | chr21:48205115-48204952 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 113, 146 |
| Conread position: | 109-249 |
| Cow position: | chr21:31258574-31258716 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 111-248 |
| Cow position: | chr21:5344988-5345127 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 119-277 |
| Cow position: | chr21:7768893-7768737 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 99, 134 |
| Conread position: | 124-252 |
| Cow position: | chr21:42227574-42227447 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 11 |
| Conread position: | 124-281 |
| Cow position: | chr21:5476702-5476857 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 129 |
| Conread position: | 125-283 |
| Cow position: | chr21:7535422-7535266 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 136 |
| Conread position: | 129-249 |
| Cow position: | chr21:47784720-47784842 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 129-271 |
| Cow position: | chr21:34209888-34209742 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 135-297 |
| Cow position: | chr21:40821761-40821605 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 104 |
| Conread position: | 137-293 |
| Cow position: | chr21:34727337-34727488 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 81, 114 |
Show alignments to all cow chromosomes.