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Cow genome map

           
Conread name:
           
Tra1-TCH01E040033
        

               
Conread position:
               
1-200
               

               
Cow position:
               
chr22:21235499-21235297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr22:18941156-18940959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr22:47525684-47525912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
219, 78
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:18099552-18099798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
219, 112
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr22:18926289-18926524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr22:22613040-22613303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
216, 158
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr22:23440359-23440163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr22:41982782-41982543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
217, 22
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr22:6289559-6289288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 22
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr22:43977627-43977341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 113
               

               
Conread position:
               
4-142
               

               
Cow position:
               
chr22:13849512-13849379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr22:34398519-34398358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr22:28704122-28704290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr22:644827-644661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr22:14924794-14924620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr22:21502680-21502856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr22:25743013-25742837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr22:26141214-26141386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr22:34476064-34475886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr22:590275-590455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr22:34712662-34712842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr22:13769408-13769601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr22:17950031-17949848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr22:23750955-23750771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr22:23856986-23857173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr22:26152869-26153058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr22:877452-877642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr22:10553747-10553556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
186, 35
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr22:24915775-24915965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr22:29185670-29185480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr22:4017415-4017605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
178, 30
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr22:26122835-26123029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
178, 30
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:2502765-2502958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:13841075-13841270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:13878122-13878309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:16044481-16044284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:17294995-17294805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:28665224-28665414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
185, 26
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:32188916-32188724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:43119790-43119597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr22:44180529-44180724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr22:3842556-3842750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr22:10285906-10286103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr22:13222050-13222250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr22:21295788-21295594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr22:3317058-3317262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr22:3908867-3909080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
165, 41
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr22:18196452-18196661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr22:4315566-4315784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
190, 103
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr22:37029667-37029441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
176, 21
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr22:27619667-27619910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 208
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr22:15025171-15024935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
216, 27
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr22:30515190-30515446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr22:9597642-9597408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 96
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr22:16251627-16251388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
192, 27
               

               
Conread position:
               
4-247
               

               
Cow position:
               
chr22:28340130-28340364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr22:11600976-11601214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr22:14178887-14178653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr22:14245506-14245259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:1025825-1026083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:3533878-3534111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
214, 29
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:4061008-4060768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:4583496-4583741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:8090590-8090355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
216, 19
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:11130806-11131049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 183
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:12315750-12315987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
216, 28
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:13957709-13957465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 179
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:14143174-14142944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
216, 70
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:14378747-14378512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
169, 29
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:16621114-16621372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
155, 29
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:23249790-23249557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:25690343-25690098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 189
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:28058114-28057862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:28071495-28071738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:40120941-40120693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 124
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr22:534438-534670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr22:18933784-18933530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr22:25221961-25221722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr22:34618734-34618990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr22:39215678-39215431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr22:12892432-12892174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 190
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr22:36433035-36432785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr22:27577680-27577941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr22:40374546-40374807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
216, 37
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr22:1309790-1309541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
216, 16
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr22:8138328-8138055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
168, 41
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr22:12678482-12678224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
216, 29
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr22:26339692-26339961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
165, 28
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr22:30998822-30999087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
218, 250
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr22:42745257-42745534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr22:16541714-16541450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr22:43131621-43131354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 21
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr22:37139371-37139629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr22:30269347-30269610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr22:31870313-31870046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
214, 60
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr22:6092718-6092458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr22:15668534-15668276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 29
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr22:19460112-19459830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr22:12829673-12829401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr22:23736075-23735804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr22:59549-59823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr22:23358089-23358362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr22:8882953-8883230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
214, 21
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr22:25246853-25247121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr22:46626446-46626162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 246
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr22:10302954-10303230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr22:10339179-10338890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
190, 90
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr22:5290787-5291071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr22:25254113-25254390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr22:5837206-5837485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
219, 123
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr22:1563314-1563019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
178, 96
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr22:9372458-9372755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr22:21567935-21568215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
278, 31
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr22:16533014-16533293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 21
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr22:33448143-33447854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 37
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr22:10122315-10122591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr22:11767110-11766822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
175, 31
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr22:24903527-24903824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr22:39602218-39602519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
216, 249
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr22:34104736-34104540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr22:845840-846040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr22:19173633-19173835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr22:25387261-25387469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr22:4119625-4119416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr22:9171344-9171554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 175
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr22:8539827-8540055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
218, 26
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr22:31646428-31646663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr22:11613364-11613610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
215, 20
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr22:17852696-17852441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr22:1983791-1984060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr22:38977780-38978042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
185, 46
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr22:39508103-39507829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr22:34441698-34441407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 183
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr22:34608941-34609222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
116, 182
               

               
Conread position:
               
6-200
               

               
Cow position:
               
chr22:6327831-6327635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr22:37947663-37947901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
212, 145
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr22:10631324-10631568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 176
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr22:12803447-12803208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
7-176
               

               
Cow position:
               
chr22:17814167-17814340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
7-180
               

               
Cow position:
               
chr22:1858274-1858444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
164, 28
               

               
Conread position:
               
7-180
               

               
Cow position:
               
chr22:23122067-23121890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
7-193
               

               
Cow position:
               
chr22:12968128-12967945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
7-198
               

               
Cow position:
               
chr22:27328951-27328765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr22:16812224-16812033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr22:32480540-32480301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr22:1326356-1326591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr22:16273578-16273815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
7-245
               

               
Cow position:
               
chr22:43321289-43321527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
7-246
               

               
Cow position:
               
chr22:17132470-17132230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
208, 18
               

               
Conread position:
               
7-248
               

               
Cow position:
               
chr22:4209053-4208814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
158, 94
               

               
Conread position:
               
7-248
               

               
Cow position:
               
chr22:10756631-10756877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
7-248
               

               
Cow position:
               
chr22:36579443-36579204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
213, 20
               

               
Conread position:
               
7-248
               

               
Cow position:
               
chr22:45513577-45513345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr22:1849012-1849255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr22:2076068-2075823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
186, 25
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr22:4075948-4075705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 174
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr22:21890418-21890186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr22:29642054-29642292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
181, 34
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr22:31599378-31599612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr22:36539723-36539479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr22:3325525-3325770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
7-269
               

               
Cow position:
               
chr22:35029206-35029460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr22:38930566-38930303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr22:12681861-12681595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
213, 190
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr22:25809331-25809081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
211, 24
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chr22:15737173-15737432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
102, 93
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr22:3301399-3301132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr22:7164905-7165180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr22:13866602-13866878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 248
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr22:23689261-23688991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
211, 42
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr22:12830502-12830234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr22:17193331-17193608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
163, 108
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr22:20323710-20323424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr22:36590140-36589858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
213, 20
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr22:1106003-1106290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
20, 247
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chr22:40387096-40387374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
7-301
               

               
Cow position:
               
chr22:12313365-12313649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
282, 18
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr22:22223128-22223485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
170, 13
               

               
Conread position:
               
8-167
               

               
Cow position:
               
chr22:29344819-29344977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr22:3950194-3950384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
8-201
               

               
Cow position:
               
chr22:2627517-2627712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
8-242
               

               
Cow position:
               
chr22:29013822-29014057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
8-249
               

               
Cow position:
               
chr22:28146615-28146862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr22:37030579-37030321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
8-275
               

               
Cow position:
               
chr22:7140584-7140850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr22:34894916-34895172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
215, 21
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr22:4292688-4292913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr22:17119759-17119987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
211, 65
               

               
Conread position:
               
9-248
               

               
Cow position:
               
chr22:12749961-12749734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 174
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr22:530624-530398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
214, 22
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr22:13720080-13719855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr22:32661452-32661694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr22:3058596-3058852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr22:5595867-5595611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 35
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr22:8733396-8733149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr22:13286394-13286645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
9-272
               

               
Cow position:
               
chr22:22860966-22860711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
211, 22
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr22:6149445-6149172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr22:11697253-11696975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr22:17652376-17652653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
213, 173
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr22:24611150-24610982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
10-201
               

               
Cow position:
               
chr22:45506062-45505872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
10-202
               

               
Cow position:
               
chr22:13932119-13932319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr22:12389041-12389282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr22:32698707-32698943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 25
               

               
Conread position:
               
10-270
               

               
Cow position:
               
chr22:4132513-4132774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
10-303
               

               
Cow position:
               
chr22:47555795-47556092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
177, 29
               

               
Conread position:
               
11-177
               

               
Cow position:
               
chr22:25943420-25943584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
11-200
               

               
Cow position:
               
chr22:3965131-3965318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
11-201
               

               
Cow position:
               
chr22:10533538-10533727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr22:13670226-13669987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
11-272
               

               
Cow position:
               
chr22:30606807-30607058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
209, 45
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr22:3987462-3987732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
11-287
               

               
Cow position:
               
chr22:18025613-18025340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr22:15153944-15154226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
207, 153
               

               
Conread position:
               
11-295
               

               
Cow position:
               
chr22:1588238-1588515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
211, 11
               

               
Conread position:
               
12-198
               

               
Cow position:
               
chr22:37324490-37324671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
12-199
               

               
Cow position:
               
chr22:14139931-14140118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-200
               

               
Cow position:
               
chr22:1035867-1035680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr22:22013695-22013946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
208, 29
               

               
Conread position:
               
13-250
               

               
Cow position:
               
chr22:23806599-23806357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
14-180
               

               
Cow position:
               
chr22:30049620-30049454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-199
               

               
Cow position:
               
chr22:26074868-26075052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
14-200
               

               
Cow position:
               
chr22:23176493-23176308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
167, 19
               

               
Conread position:
               
14-246
               

               
Cow position:
               
chr22:14091276-14091044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
14-247
               

               
Cow position:
               
chr22:15068374-15068607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
206, 21
               

               
Conread position:
               
14-249
               

               
Cow position:
               
chr22:21012332-21012565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
187, 25
               

               
Conread position:
               
14-250
               

               
Cow position:
               
chr22:6721132-6720900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
206, 86
               

               
Conread position:
               
14-291
               

               
Cow position:
               
chr22:1714917-1714644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
206, 19
               

               
Conread position:
               
14-297
               

               
Cow position:
               
chr22:12157898-12157621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
213, 166
               

               
Conread position:
               
15-252
               

               
Cow position:
               
chr22:23676017-23675790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
15-276
               

               
Cow position:
               
chr22:8429835-8430098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
205, 10
               

               
Conread position:
               
15-290
               

               
Cow position:
               
chr22:27681665-27681941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
18-272
               

               
Cow position:
               
chr22:16235555-16235302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
158, 235
               

               
Conread position:
               
18-284
               

               
Cow position:
               
chr22:17581472-17581208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
200, 17
               

               
Conread position:
               
20-287
               

               
Cow position:
               
chr22:43965650-43965916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr22:2632796-2633063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
22-293
               

               
Cow position:
               
chr22:33985845-33985588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr22:27275416-27275671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
25-246
               

               
Cow position:
               
chr22:4108773-4108551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
193, 135
               

               
Conread position:
               
25-246
               

               
Cow position:
               
chr22:33098434-33098217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
195, 37
               

               
Conread position:
               
25-249
               

               
Cow position:
               
chr22:4310412-4310189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr22:37145284-37145520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
195, 86
               

               
Conread position:
               
25-274
               

               
Cow position:
               
chr22:22022846-22023105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
52, 238
               

               
Conread position:
               
25-288
               

               
Cow position:
               
chr22:43704908-43704651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
198, 109
               

               
Conread position:
               
25-296
               

               
Cow position:
               
chr22:23372907-23372638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
26-239
               

               
Cow position:
               
chr22:12570943-12570729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
26-264
               

               
Cow position:
               
chr22:43237450-43237210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
194, 158
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr22:13308636-13308883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
27-200
               

               
Cow position:
               
chr22:21530400-21530227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
27-249
               

               
Cow position:
               
chr22:4156858-4156636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
196, 156
               

               
Conread position:
               
28-290
               

               
Cow position:
               
chr22:35215508-35215766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
32-178
               

               
Cow position:
               
chr22:11344474-11344618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr22:3470251-3470469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
33-186
               

               
Cow position:
               
chr22:23398439-23398286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
33-200
               

               
Cow position:
               
chr22:24032250-24032085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
33-221
               

               
Cow position:
               
chr22:14141377-14141191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
33-221
               

               
Cow position:
               
chr22:33332804-33332993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 8
               

               
Conread position:
               
33-235
               

               
Cow position:
               
chr22:6622282-6622082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
190, 94
               

               
Conread position:
               
33-235
               

               
Cow position:
               
chr22:17128977-17129172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
184, 8
               

               
Conread position:
               
33-235
               

               
Cow position:
               
chr22:27907914-27907710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
33-238
               

               
Cow position:
               
chr22:37066837-37066635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
187, 94
               

               
Conread position:
               
33-248
               

               
Cow position:
               
chr22:38313512-38313295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
33-249
               

               
Cow position:
               
chr22:12447421-12447628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
187, 140
               

               
Conread position:
               
33-249
               

               
Cow position:
               
chr22:14372144-14372347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
187, 48
               

               
Conread position:
               
33-249
               

               
Cow position:
               
chr22:37201814-37202028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
187, 127
               

               
Conread position:
               
33-270
               

               
Cow position:
               
chr22:7362010-7361775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
167, 7
               

               
Conread position:
               
33-270
               

               
Cow position:
               
chr22:42230557-42230324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
33-284
               

               
Cow position:
               
chr22:24584100-24583863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
34-202
               

               
Cow position:
               
chr22:24223036-24223205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 101
               

               
Conread position:
               
34-245
               

               
Cow position:
               
chr22:17070803-17071016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
161, 95
               

               
Conread position:
               
34-249
               

               
Cow position:
               
chr22:8287153-8287360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
184, 67
               

               
Conread position:
               
34-249
               

               
Cow position:
               
chr22:41853871-41854082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 155
               

               
Conread position:
               
34-250
               

               
Cow position:
               
chr22:18967192-18966980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
188, 32
               

               
Conread position:
               
34-252
               

               
Cow position:
               
chr22:14647049-14647283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
156, 126
               

               
Conread position:
               
34-285
               

               
Cow position:
               
chr22:15950897-15950657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
184, 108
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr22:24134357-24134109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
186, 66
               

               
Conread position:
               
34-288
               

               
Cow position:
               
chr22:7081992-7082242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
186, 149
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr22:14545962-14545702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 257
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr22:26112332-26112585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
34-293
               

               
Cow position:
               
chr22:15618570-15618833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
35-176
               

               
Cow position:
               
chr22:7851931-7852072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr22:35161379-35161220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
35-247
               

               
Cow position:
               
chr22:10691621-10691420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
183, 92
               

               
Conread position:
               
35-247
               

               
Cow position:
               
chr22:17259200-17258984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr22:27274731-27274510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
146, 28
               

               
Conread position:
               
35-249
               

               
Cow position:
               
chr22:30643167-30642953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
153, 205
               

               
Conread position:
               
35-269
               

               
Cow position:
               
chr22:6754300-6754067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
89, 219
               

               
Conread position:
               
35-273
               

               
Cow position:
               
chr22:39446259-39446494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 39
               

               
Conread position:
               
35-274
               

               
Cow position:
               
chr22:3937020-3937262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
35-283
               

               
Cow position:
               
chr22:32326766-32327009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 163
               

               
Conread position:
               
35-288
               

               
Cow position:
               
chr22:23181075-23180830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
35-290
               

               
Cow position:
               
chr22:9668542-9668801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
35-294
               

               
Cow position:
               
chr22:12800636-12800896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
35-298
               

               
Cow position:
               
chr22:21471879-21472141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
185, 66
               

               
Conread position:
               
35-299
               

               
Cow position:
               
chr22:3430155-3430423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
6, 115
               

               
Conread position:
               
36-173
               

               
Cow position:
               
chr22:10174153-10174015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
36-196
               

               
Cow position:
               
chr22:26421953-26421801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
148, 91
               

               
Conread position:
               
36-226
               

               
Cow position:
               
chr22:25846353-25846166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
36-240
               

               
Cow position:
               
chr22:17198106-17198312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
36-246
               

               
Cow position:
               
chr22:1484831-1485043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
36-246
               

               
Cow position:
               
chr22:16806563-16806764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 91
               

               
Conread position:
               
36-249
               

               
Cow position:
               
chr22:5712556-5712764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
36-249
               

               
Cow position:
               
chr22:10532468-10532673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
36-272
               

               
Cow position:
               
chr22:9983846-9983626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
182, 58
               

               
Conread position:
               
36-277
               

               
Cow position:
               
chr22:47332278-47332042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
37-249
               

               
Cow position:
               
chr22:12188511-12188294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
160, 26
               

               
Conread position:
               
37-270
               

               
Cow position:
               
chr22:4657074-4656849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
185, 137
               

               
Conread position:
               
37-270
               

               
Cow position:
               
chr22:26417252-26417482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
182, 160
               

               
Conread position:
               
37-272
               

               
Cow position:
               
chr22:27828347-27828576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
180, 137
               

               
Conread position:
               
37-282
               

               
Cow position:
               
chr22:26803788-26804032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
38-201
               

               
Cow position:
               
chr22:28120690-28120859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
39-248
               

               
Cow position:
               
chr22:25764523-25764313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
179, 77
               

               
Conread position:
               
40-199
               

               
Cow position:
               
chr22:6326416-6326575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
40-215
               

               
Cow position:
               
chr22:14690999-14690825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
40-245
               

               
Cow position:
               
chr22:16845432-16845217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
40-246
               

               
Cow position:
               
chr22:6097045-6096839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
182, 144
               

               
Conread position:
               
40-249
               

               
Cow position:
               
chr22:16724715-16724508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
133, 158
               

               
Conread position:
               
40-252
               

               
Cow position:
               
chr22:23265680-23265466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
40-270
               

               
Cow position:
               
chr22:32514263-32514502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
40-272
               

               
Cow position:
               
chr22:1065077-1065306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
177, 66
               

               
Conread position:
               
40-275
               

               
Cow position:
               
chr22:8412498-8412732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
40-283
               

               
Cow position:
               
chr22:47562675-47562921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
53, 212
               

               
Conread position:
               
40-288
               

               
Cow position:
               
chr22:22433014-22433268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
41-170
               

               
Cow position:
               
chr22:29842731-29842602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-185
               

               
Cow position:
               
chr22:4541908-4542051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
41-213
               

               
Cow position:
               
chr22:29316716-29316540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 144
               

               
Conread position:
               
41-249
               

               
Cow position:
               
chr22:4157113-4156900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
41-249
               

               
Cow position:
               
chr22:8418434-8418644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
41-249
               

               
Cow position:
               
chr22:14600361-14600153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
41-250
               

               
Cow position:
               
chr22:24802727-24802509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
41-257
               

               
Cow position:
               
chr22:12902874-12902668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
177, 51
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr22:1776032-1776264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
69, 65
               

               
Conread position:
               
41-290
               

               
Cow position:
               
chr22:11146886-11147126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
41-290
               

               
Cow position:
               
chr22:11352479-11352228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 215
               

               
Conread position:
               
41-290
               

               
Cow position:
               
chr22:12929306-12929062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
177, 21
               

               
Conread position:
               
41-292
               

               
Cow position:
               
chr22:30446521-30446276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
182, 65
               

               
Conread position:
               
42-283
               

               
Cow position:
               
chr22:28937958-28937732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
43-186
               

               
Cow position:
               
chr22:18835933-18835789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
43-247
               

               
Cow position:
               
chr22:2643905-2644111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
160, 23
               

               
Conread position:
               
43-249
               

               
Cow position:
               
chr22:27008009-27008217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
43-272
               

               
Cow position:
               
chr22:4735998-4736225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
177, 210
               

               
Conread position:
               
44-178
               

               
Cow position:
               
chr22:10752566-10752432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
44-246
               

               
Cow position:
               
chr22:45374917-45375111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
44-281
               

               
Cow position:
               
chr22:6600706-6600471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 60
               

               
Conread position:
               
44-303
               

               
Cow position:
               
chr22:16129118-16129372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
45-287
               

               
Cow position:
               
chr22:1865755-1865996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 202
               

               
Conread position:
               
45-296
               

               
Cow position:
               
chr22:19414060-19413811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 208
               

               
Conread position:
               
46-246
               

               
Cow position:
               
chr22:14676663-14676865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
47-282
               

               
Cow position:
               
chr22:2105552-2105791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
36, 204
               

               
Conread position:
               
47-298
               

               
Cow position:
               
chr22:16840818-16840569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
176, 206
               

               
Conread position:
               
48-196
               

               
Cow position:
               
chr22:31510400-31510250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 58
               

               
Conread position:
               
50-245
               

               
Cow position:
               
chr22:16993150-16993349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
51-228
               

               
Cow position:
               
chr22:16583429-16583608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
51-249
               

               
Cow position:
               
chr22:26267833-26268028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
51-269
               

               
Cow position:
               
chr22:44741059-44741269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
161, 129
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr22:35957223-35956997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
51-286
               

               
Cow position:
               
chr22:8709058-8708820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
154, 20
               

               
Conread position:
               
51-299
               

               
Cow position:
               
chr22:14487918-14488162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
169, 202
               

               
Conread position:
               
56-249
               

               
Cow position:
               
chr22:45104287-45104085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
57-246
               

               
Cow position:
               
chr22:8330987-8331178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
57-249
               

               
Cow position:
               
chr22:14641868-14641676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
163, 70
               

               
Conread position:
               
57-270
               

               
Cow position:
               
chr22:16797859-16797631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
57-299
               

               
Cow position:
               
chr22:1821596-1821363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
163, 146
               

               
Conread position:
               
57-315
               

               
Cow position:
               
chr22:1710518-1710783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
58-233
               

               
Cow position:
               
chr22:31350-31173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
58-249
               

               
Cow position:
               
chr22:9279017-9279201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
58-284
               

               
Cow position:
               
chr22:16339845-16340068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
60-240
               

               
Cow position:
               
chr22:10913655-10913832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
64-250
               

               
Cow position:
               
chr22:35627337-35627531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
65-287
               

               
Cow position:
               
chr22:2409135-2408911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
155, 200
               

               
Conread position:
               
66-252
               

               
Cow position:
               
chr22:1728232-1728415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
66-273
               

               
Cow position:
               
chr22:965178-964968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
67-247
               

               
Cow position:
               
chr22:45012754-45012584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
67-287
               

               
Cow position:
               
chr22:33373240-33373457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
68-196
               

               
Cow position:
               
chr22:6655762-6655631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
68-249
               

               
Cow position:
               
chr22:3693332-3693517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
68-275
               

               
Cow position:
               
chr22:23209564-23209769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
152, 185
               

               
Conread position:
               
68-290
               

               
Cow position:
               
chr22:30713044-30713270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
68-296
               

               
Cow position:
               
chr22:1046192-1045956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
68-299
               

               
Cow position:
               
chr22:23630351-23630127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
69-294
               

               
Cow position:
               
chr22:5375395-5375617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 88
               

               
Conread position:
               
70-271
               

               
Cow position:
               
chr22:12777375-12777181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 112
               

               
Conread position:
               
70-292
               

               
Cow position:
               
chr22:35578775-35578551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 88
               

               
Conread position:
               
71-248
               

               
Cow position:
               
chr22:43525962-43526139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
149, 119
               

               
Conread position:
               
71-283
               

               
Cow position:
               
chr22:6202951-6203158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
149, 182
               

               
Conread position:
               
71-286
               

               
Cow position:
               
chr22:12673332-12673119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
147, 182
               

               
Conread position:
               
71-288
               

               
Cow position:
               
chr22:30687029-30687232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
71-290
               

               
Cow position:
               
chr22:30176721-30176938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
147, 30
               

               
Conread position:
               
71-335
               

               
Cow position:
               
chr22:5921969-5921700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
149, 140
               

               
Conread position:
               
72-282
               

               
Cow position:
               
chr22:2704302-2704513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
148, 112
               

               
Conread position:
               
73-233
               

               
Cow position:
               
chr22:9347042-9346883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 46
               

               
Conread position:
               
73-295
               

               
Cow position:
               
chr22:7518560-7518773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 109
               

               
Conread position:
               
73-296
               

               
Cow position:
               
chr22:35533227-35533005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
74-248
               

               
Cow position:
               
chr22:29949883-29950059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
74-260
               

               
Cow position:
               
chr22:20166857-20166670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
146, 81
               

               
Conread position:
               
75-246
               

               
Cow position:
               
chr22:36209260-36209433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
75-249
               

               
Cow position:
               
chr22:45772017-45771846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
75-283
               

               
Cow position:
               
chr22:14602165-14601965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
76-235
               

               
Cow position:
               
chr22:34090623-34090463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
77-290
               

               
Cow position:
               
chr22:30615739-30615947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
150, 157
               

               
Conread position:
               
82-249
               

               
Cow position:
               
chr22:3541104-3540940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
141, 92
               

               
Conread position:
               
82-292
               

               
Cow position:
               
chr22:29219891-29219681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
82-296
               

               
Cow position:
               
chr22:43131129-43130913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
82-306
               

               
Cow position:
               
chr22:6485976-6486204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
106, 127
               

               
Conread position:
               
85-291
               

               
Cow position:
               
chr22:25312526-25312733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
135, 171
               

               
Conread position:
               
86-270
               

               
Cow position:
               
chr22:39493818-39493636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 160
               

               
Conread position:
               
86-283
               

               
Cow position:
               
chr22:39472140-39471942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
95-254
               

               
Cow position:
               
chr22:36762065-36762222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
123, 89
               

               
Conread position:
               
95-271
               

               
Cow position:
               
chr22:11790010-11790184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 158
               

               
Conread position:
               
95-272
               

               
Cow position:
               
chr22:18403272-18403446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
125, 99
               

               
Conread position:
               
95-273
               

               
Cow position:
               
chr22:1074291-1074467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 158
               

               
Conread position:
               
96-273
               

               
Cow position:
               
chr22:12637628-12637801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
124, 90
               

               
Conread position:
               
101-249
               

               
Cow position:
               
chr22:2438944-2438795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 110
               

               
Conread position:
               
103-252
               

               
Cow position:
               
chr22:18441115-18441267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
107-235
               

               
Cow position:
               
chr22:6686683-6686553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
108-272
               

               
Cow position:
               
chr22:19305938-19306100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 145
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr22:9075447-9075629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 146
               

               
Conread position:
               
114-276
               

               
Cow position:
               
chr22:800017-800188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 162
               

               
Conread position:
               
129-288
               

               
Cow position:
               
chr22:31409298-31409459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 140
               

               
Conread position:
               
134-274
               

               
Cow position:
               
chr22:5644361-5644222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 119
               

               
Conread position:
               
152-293
               

               
Cow position:
               
chr22:28290424-28290563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 101
               
Show alignments to all cow chromosomes.