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Cow genome map

           
Conread name:
           
Tra1-TCH01E040033
        

               
Conread position:
               
3-170
               

               
Cow position:
               
chr24:17860345-17860177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr24:3493802-3494040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr24:10299997-10300254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
197, 78
               

               
Conread position:
               
4-106
               

               
Cow position:
               
chr24:19633989-19634090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chr24:8886827-8886990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr24:29679392-29679227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr24:27290786-27290960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr24:16268211-16268038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr24:17955524-17955354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr24:34496035-34496215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr24:16895213-16895045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr24:29063737-29063565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr24:27418184-27418003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr24:10125789-10125990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr24:28042889-28043081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 177
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr24:35150439-35150625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr24:43364276-43364467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr24:34008659-34008464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr24:39791456-39791649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr24:28327169-28326970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr24:18368752-18368561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr24:15373324-15373526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr24:27726098-27725885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 179
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr24:19466004-19465786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 165
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr24:17832896-17832684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
216, 32
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr24:16645406-16645173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 189
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr24:29782081-29782309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr24:39289960-39290192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr24:6912451-6912203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 226
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr24:6102742-6102983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr24:36008403-36008642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
219, 21
               

               
Conread position:
               
4-247
               

               
Cow position:
               
chr24:27039964-27040207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
216, 52
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr24:37267578-37267823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:230193-230439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 183
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:352688-352445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
198, 20
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:7476435-7476191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:17311302-17311070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
219, 88
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:18741653-18741406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:27713490-27713251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:29561659-29561420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:30229388-30229633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
145, 182
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:30235784-30236031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:37395292-37395048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:37823445-37823683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
219, 21
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr24:24491101-24490862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr24:10499129-10499394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr24:18999966-19000219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
171, 18
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr24:27284737-27285005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
188, 27
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr24:34742669-34742925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr24:42862540-42862801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
208, 41
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr24:15861683-15861414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 239
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr24:31159538-31159812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
178, 26
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr24:5141861-5142119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
201, 21
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr24:9070521-9070263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
173, 29
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr24:44987461-44987192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 250
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr24:30314112-30313846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr24:27349263-27348990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr24:19179522-19179252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr24:37975066-37974799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr24:22689664-22689390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr24:28721808-28722065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr24:15288737-15289018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 185
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr24:16509888-16510169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr24:19800763-19801032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 37
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr24:3656450-3656165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr24:9222467-9222181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr24:30484033-30483747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
113, 208
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr24:31812104-31812389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
217, 180
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr24:28303450-28303161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr24:32054577-32054848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
171, 37
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr24:39911120-39910827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr24:11840106-11840400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
7-200
               

               
Cow position:
               
chr24:28319292-28319100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 174
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr24:40389527-40389723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 132
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr24:26554679-26554457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr24:42345082-42344856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr24:10536273-10536507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
7-248
               

               
Cow position:
               
chr24:38814886-38815132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
167, 20
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr24:40592635-40592872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
7-269
               

               
Cow position:
               
chr24:14550712-14550965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
7-269
               

               
Cow position:
               
chr24:17609329-17609592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
167, 25
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr24:7913924-7914186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
213, 239
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr24:13948041-13948299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chr24:18810763-18811018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
205, 71
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr24:41980741-41980477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
213, 93
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr24:12200492-12200219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 230
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr24:35332641-35332928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr24:24662210-24661919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr24:17407308-17407606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
213, 18
               

               
Conread position:
               
8-245
               

               
Cow position:
               
chr24:24810431-24810681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr24:25263818-25263556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
181, 13
               

               
Conread position:
               
8-273
               

               
Cow position:
               
chr24:10031508-10031753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr24:19535333-19535065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
212, 24
               

               
Conread position:
               
8-302
               

               
Cow position:
               
chr24:19028770-19029046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
260, 17
               

               
Conread position:
               
8-316
               

               
Cow position:
               
chr24:17104651-17104346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
212, 176
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr24:18614921-18615091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
9-199
               

               
Cow position:
               
chr24:18970585-18970399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
9-206
               

               
Cow position:
               
chr24:20249975-20249779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr24:5683199-5683401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
9-248
               

               
Cow position:
               
chr24:28342274-28342520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr24:39523525-39523291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
211, 21
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr24:19623780-19624042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
165, 13
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr24:22511478-22511762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
165, 25
               

               
Conread position:
               
10-177
               

               
Cow position:
               
chr24:16118288-16118448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr24:27202013-27202228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr24:2992955-2992721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
210, 15
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr24:29595886-29595641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
179, 24
               

               
Conread position:
               
10-250
               

               
Cow position:
               
chr24:22225105-22225351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
10-270
               

               
Cow position:
               
chr24:5633109-5632852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
160, 31
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr24:28690609-28690773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
11-200
               

               
Cow position:
               
chr24:20364488-20364299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr24:16994808-16995037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
209, 10
               

               
Conread position:
               
11-252
               

               
Cow position:
               
chr24:23556415-23556175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
11-275
               

               
Cow position:
               
chr24:28699974-28700224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr24:18755678-18755943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
12-250
               

               
Cow position:
               
chr24:28496660-28496422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 169
               

               
Conread position:
               
12-285
               

               
Cow position:
               
chr24:28062876-28063147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr24:7846768-7846538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
205, 7
               

               
Conread position:
               
15-270
               

               
Cow position:
               
chr24:28233971-28234220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
205, 85
               

               
Conread position:
               
18-245
               

               
Cow position:
               
chr24:26929013-26928786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
202, 13
               

               
Conread position:
               
20-249
               

               
Cow position:
               
chr24:33098544-33098313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 178
               

               
Conread position:
               
20-299
               

               
Cow position:
               
chr24:11028752-11028484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
202, 15
               

               
Conread position:
               
21-274
               

               
Cow position:
               
chr24:34272743-34272999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
22-279
               

               
Cow position:
               
chr24:33621544-33621287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
196, 28
               

               
Conread position:
               
22-286
               

               
Cow position:
               
chr24:39627804-39628076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
25-298
               

               
Cow position:
               
chr24:21606737-21606472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
195, 75
               

               
Conread position:
               
25-302
               

               
Cow position:
               
chr24:28060790-28061075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
26-247
               

               
Cow position:
               
chr24:9036124-9036345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
194, 9
               

               
Conread position:
               
26-249
               

               
Cow position:
               
chr24:6742158-6742384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
30-194
               

               
Cow position:
               
chr24:42981816-42981657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
30-235
               

               
Cow position:
               
chr24:17294249-17294050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
182, 57
               

               
Conread position:
               
31-238
               

               
Cow position:
               
chr24:32693661-32693872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
31-240
               

               
Cow position:
               
chr24:27096632-27096844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
143, 66
               

               
Conread position:
               
31-246
               

               
Cow position:
               
chr24:19730721-19730938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
31-246
               

               
Cow position:
               
chr24:23575220-23575003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
31-287
               

               
Cow position:
               
chr24:390047-390293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
189, 13
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr24:6008234-6008011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
32-269
               

               
Cow position:
               
chr24:14348014-14348251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
142, 17
               

               
Conread position:
               
33-218
               

               
Cow position:
               
chr24:31309336-31309522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
33-248
               

               
Cow position:
               
chr24:5360667-5360869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
33-248
               

               
Cow position:
               
chr24:18344007-18344224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
33-273
               

               
Cow position:
               
chr24:20225685-20225925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
142, 8
               

               
Conread position:
               
33-281
               

               
Cow position:
               
chr24:29586941-29587192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr24:43220127-43219869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
190, 12
               

               
Conread position:
               
34-168
               

               
Cow position:
               
chr24:29538567-29538427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
34-230
               

               
Cow position:
               
chr24:30038816-30039014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
34-235
               

               
Cow position:
               
chr24:42364180-42364381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
186, 130
               

               
Conread position:
               
34-249
               

               
Cow position:
               
chr24:19186891-19187091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
186, 15
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr24:13587047-13586815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
34-282
               

               
Cow position:
               
chr24:43371189-43371433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
189, 151
               

               
Conread position:
               
34-293
               

               
Cow position:
               
chr24:22114671-22114937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr24:7390387-7390226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr24:40404862-40404701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
35-234
               

               
Cow position:
               
chr24:19629452-19629653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 164
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr24:24155566-24155352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
185, 78
               

               
Conread position:
               
35-249
               

               
Cow position:
               
chr24:18374714-18374923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
181, 140
               

               
Conread position:
               
35-249
               

               
Cow position:
               
chr24:27630345-27630558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
185, 105
               

               
Conread position:
               
35-282
               

               
Cow position:
               
chr24:26001333-26001575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
183, 145
               

               
Conread position:
               
35-283
               

               
Cow position:
               
chr24:38612829-38613082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
6, 162
               

               
Conread position:
               
35-283
               

               
Cow position:
               
chr24:43365780-43366029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
185, 140
               

               
Conread position:
               
35-296
               

               
Cow position:
               
chr24:15353388-15353649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
185, 129
               

               
Conread position:
               
36-196
               

               
Cow position:
               
chr24:17375585-17375746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
36-248
               

               
Cow position:
               
chr24:27300105-27300319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
36-278
               

               
Cow position:
               
chr24:42984338-42984579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
127, 218
               

               
Conread position:
               
36-294
               

               
Cow position:
               
chr24:42175477-42175725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
36-369
               

               
Cow position:
               
chr24:25092469-25092804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
182, 70
               

               
Conread position:
               
37-185
               

               
Cow position:
               
chr24:4724917-4725063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
37-195
               

               
Cow position:
               
chr24:20969714-20969559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
37-199
               

               
Cow position:
               
chr24:14648411-14648249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-238
               

               
Cow position:
               
chr24:8392814-8393017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
37-278
               

               
Cow position:
               
chr24:41405838-41406078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 196
               

               
Conread position:
               
37-286
               

               
Cow position:
               
chr24:20801398-20801154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 137
               

               
Conread position:
               
37-307
               

               
Cow position:
               
chr24:6928607-6928338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
138, 123
               

               
Conread position:
               
38-247
               

               
Cow position:
               
chr24:10294441-10294231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
180, 190
               

               
Conread position:
               
39-221
               

               
Cow position:
               
chr24:15347539-15347720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
102, 124
               

               
Conread position:
               
39-245
               

               
Cow position:
               
chr24:6515485-6515276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 142
               

               
Conread position:
               
39-248
               

               
Cow position:
               
chr24:19637533-19637744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 151
               

               
Conread position:
               
40-195
               

               
Cow position:
               
chr24:28470729-28470574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
40-249
               

               
Cow position:
               
chr24:34390233-34390430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
40-254
               

               
Cow position:
               
chr24:11036884-11036674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
180, 142
               

               
Conread position:
               
41-201
               

               
Cow position:
               
chr24:33465666-33465510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr24:8676775-8677006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
179, 150
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr24:21519381-21519611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
179, 70
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr24:22647391-22647156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
42-296
               

               
Cow position:
               
chr24:34915465-34915216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
229, 116
               

               
Conread position:
               
43-283
               

               
Cow position:
               
chr24:18137354-18137111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
45-250
               

               
Cow position:
               
chr24:34465550-34465333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
46-245
               

               
Cow position:
               
chr24:19966119-19965921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
174, 111
               

               
Conread position:
               
46-249
               

               
Cow position:
               
chr24:22194371-22194573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
48-253
               

               
Cow position:
               
chr24:22133130-22133329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
200, 134
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr24:13888665-13888895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
51-247
               

               
Cow position:
               
chr24:18730306-18730504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
51-269
               

               
Cow position:
               
chr24:15052760-15052538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr24:5447306-5447090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
169, 188
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr24:17309175-17308960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
167, 55
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr24:34079377-34079162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
169, 77
               

               
Conread position:
               
53-200
               

               
Cow position:
               
chr24:5143996-5143849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 136
               

               
Conread position:
               
53-270
               

               
Cow position:
               
chr24:32891080-32890869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
167, 129
               

               
Conread position:
               
54-249
               

               
Cow position:
               
chr24:26880718-26880914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
54-299
               

               
Cow position:
               
chr24:36711159-36711407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
166, 177
               

               
Conread position:
               
55-230
               

               
Cow position:
               
chr24:19598871-19599048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
55-302
               

               
Cow position:
               
chr24:22567069-22567314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
56-249
               

               
Cow position:
               
chr24:32230541-32230345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
56-290
               

               
Cow position:
               
chr24:3176695-3176457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
164, 71
               

               
Conread position:
               
56-296
               

               
Cow position:
               
chr24:2359219-2358984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
58-257
               

               
Cow position:
               
chr24:6901111-6901311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
162, 48
               

               
Conread position:
               
58-298
               

               
Cow position:
               
chr24:36286538-36286774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
162, 122
               

               
Conread position:
               
59-249
               

               
Cow position:
               
chr24:5152493-5152685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
59-272
               

               
Cow position:
               
chr24:11836434-11836223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
161, 194
               

               
Conread position:
               
60-270
               

               
Cow position:
               
chr24:32979197-32978999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
60-275
               

               
Cow position:
               
chr24:27066201-27066411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
157, 68
               

               
Conread position:
               
62-285
               

               
Cow position:
               
chr24:18874848-18874632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
158, 93
               

               
Conread position:
               
62-294
               

               
Cow position:
               
chr24:44776204-44775974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
158, 184
               

               
Conread position:
               
63-276
               

               
Cow position:
               
chr24:16640883-16641095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 187
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr24:22419935-22420163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
156, 182
               

               
Conread position:
               
66-249
               

               
Cow position:
               
chr24:31383097-31383267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
66-270
               

               
Cow position:
               
chr24:18405302-18405103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
154, 12
               

               
Conread position:
               
68-245
               

               
Cow position:
               
chr24:34302057-34301881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
68-272
               

               
Cow position:
               
chr24:2261646-2261848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
150, 185
               

               
Conread position:
               
68-273
               

               
Cow position:
               
chr24:33238286-33238075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
114, 193
               

               
Conread position:
               
68-287
               

               
Cow position:
               
chr24:39304942-39304717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
134, 104
               

               
Conread position:
               
68-301
               

               
Cow position:
               
chr24:12120875-12121109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
152, 178
               

               
Conread position:
               
69-249
               

               
Cow position:
               
chr24:161983-162165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
69-249
               

               
Cow position:
               
chr24:27270906-27271088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
69-273
               

               
Cow position:
               
chr24:39904024-39903829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
151, 58
               

               
Conread position:
               
70-196
               

               
Cow position:
               
chr24:28024260-28024386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
70-275
               

               
Cow position:
               
chr24:42194759-42194556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 78
               

               
Conread position:
               
71-200
               

               
Cow position:
               
chr24:22235449-22235578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-235
               

               
Cow position:
               
chr24:19793401-19793236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
72-250
               

               
Cow position:
               
chr24:9300611-9300790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
72-290
               

               
Cow position:
               
chr24:27553078-27553306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 64
               

               
Conread position:
               
73-241
               

               
Cow position:
               
chr24:7113206-7113384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
74-248
               

               
Cow position:
               
chr24:3542284-3542460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
76-249
               

               
Cow position:
               
chr24:4635181-4635006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
76-275
               

               
Cow position:
               
chr24:35250125-35249928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
156, 141
               

               
Conread position:
               
76-299
               

               
Cow position:
               
chr24:34595742-34595519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 170
               

               
Conread position:
               
78-297
               

               
Cow position:
               
chr24:5491007-5490791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
140, 173
               

               
Conread position:
               
79-201
               

               
Cow position:
               
chr24:256016-256138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
79-249
               

               
Cow position:
               
chr24:20323512-20323339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
79-294
               

               
Cow position:
               
chr24:26569447-26569657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
80-289
               

               
Cow position:
               
chr24:39790447-39790652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
140, 159
               

               
Conread position:
               
81-240
               

               
Cow position:
               
chr24:11736080-11735920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
81-272
               

               
Cow position:
               
chr24:25142601-25142795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
82-249
               

               
Cow position:
               
chr24:36554705-36554542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
138, 107
               

               
Conread position:
               
82-252
               

               
Cow position:
               
chr24:41244504-41244673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 133
               

               
Conread position:
               
82-273
               

               
Cow position:
               
chr24:23046905-23046716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 171
               

               
Conread position:
               
82-281
               

               
Cow position:
               
chr24:36010413-36010618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
84-293
               

               
Cow position:
               
chr24:20017433-20017227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
136, 172
               

               
Conread position:
               
89-276
               

               
Cow position:
               
chr24:14373584-14373396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
90-249
               

               
Cow position:
               
chr24:22221378-22221539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
94-270
               

               
Cow position:
               
chr24:885437-885264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
94-270
               

               
Cow position:
               
chr24:18702403-18702576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 67
               

               
Conread position:
               
94-280
               

               
Cow position:
               
chr24:34006204-34006021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
94-283
               

               
Cow position:
               
chr24:25947857-25947670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 155
               

               
Conread position:
               
95-299
               

               
Cow position:
               
chr24:27149389-27149590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
173, 140
               

               
Conread position:
               
97-272
               

               
Cow position:
               
chr24:250530-250356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
123, 149
               

               
Conread position:
               
97-282
               

               
Cow position:
               
chr24:3148228-3148046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
107-249
               

               
Cow position:
               
chr24:26588238-26588377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
109-252
               

               
Cow position:
               
chr24:38428093-38427948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
116-249
               

               
Cow position:
               
chr24:17178630-17178765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
119-249
               

               
Cow position:
               
chr24:18817416-18817548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
137-283
               

               
Cow position:
               
chr24:7917334-7917184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               
Show alignments to all cow chromosomes.