Cow genome map

Conread name: Tra1-TCH01E040033

Conread position: 3-200
Cow position: chr29:13867273-13867076 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 182, 28

Conread position: 4-169
Cow position: chr29:18012494-18012660 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 4-176
Cow position: chr29:463718-463543 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 156

Conread position: 4-178
Cow position: chr29:11647029-11647205 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 62

Conread position: 4-179
Cow position: chr29:8004983-8004815 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 4-180
Cow position: chr29:19428599-19428773 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 31

Conread position: 4-180
Cow position: chr29:22936210-22936384 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 138, 30

Conread position: 4-198
Cow position: chr29:24252177-24252362 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 17, 36

Conread position: 4-199
Cow position: chr29:22175627-22175814 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 187, 28

Conread position: 4-200
Cow position: chr29:749970-749774 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 123

Conread position: 4-200
Cow position: chr29:18404175-18403984 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 4-200
Cow position: chr29:22519190-22518994 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 21

Conread position: 4-201
Cow position: chr29:13372605-13372797 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 0

Conread position: 4-201
Cow position: chr29:25333524-25333327 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 31, 20

Conread position: 4-208
Cow position: chr29:32926036-32926244 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 35, 191

Conread position: 4-239
Cow position: chr29:30548713-30548948 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 216, 171

Conread position: 4-239
Cow position: chr29:40583733-40583960 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 176, 20

Conread position: 4-246
Cow position: chr29:28587389-28587623 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 0

Conread position: 4-248
Cow position: chr29:16609682-16609931 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 4-249
Cow position: chr29:4120788-4121038 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 4-249
Cow position: chr29:19762210-19762445 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 4-249
Cow position: chr29:20770283-20770526 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 102

Conread position: 4-249
Cow position: chr29:25474860-25475115 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 42

Conread position: 4-249
Cow position: chr29:29769411-29769172 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 27

Conread position: 4-249
Cow position: chr29:32894208-32894439 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 214, 21

Conread position: 4-249
Cow position: chr29:35458833-35458587 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 159, 21

Conread position: 4-249
Cow position: chr29:40994950-40994697 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 178, 27

Conread position: 4-250
Cow position: chr29:8669305-8669538 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 215, 31

Conread position: 4-270
Cow position: chr29:5995161-5994890 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 125

Conread position: 4-270
Cow position: chr29:23825608-23825867 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 102, 29

Conread position: 4-270
Cow position: chr29:25737478-25737215 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 179

Conread position: 4-270
Cow position: chr29:37618241-37618507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 248

Conread position: 4-270
Cow position: chr29:41530787-41531050 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 41

Conread position: 4-274
Cow position: chr29:9709635-9709899 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 26

Conread position: 4-277
Cow position: chr29:20167362-20167629 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 168, 21

Conread position: 4-279
Cow position: chr29:26477479-26477754 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 69, 243

Conread position: 4-282
Cow position: chr29:17222353-17222627 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 154, 21

Conread position: 4-283
Cow position: chr29:29057119-29057392 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 29

Conread position: 4-283
Cow position: chr29:31674568-31674849 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 202

Conread position: 4-283
Cow position: chr29:34359041-34358757 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 26, 42

Conread position: 4-283
Cow position: chr29:34745721-34745449 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 68

Conread position: 4-286
Cow position: chr29:18450195-18449921 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 34

Conread position: 4-286
Cow position: chr29:31928925-31929201 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 125

Conread position: 4-288
Cow position: chr29:40117510-40117780 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 31

Conread position: 4-289
Cow position: chr29:22778237-22777960 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 145, 31

Conread position: 4-290
Cow position: chr29:24292810-24293090 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 148, 28

Conread position: 4-290
Cow position: chr29:30227333-30227061 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 216, 28

Conread position: 4-292
Cow position: chr29:16195782-16196075 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 175, 21

Conread position: 4-293
Cow position: chr29:23874397-23874684 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 122

Conread position: 4-293
Cow position: chr29:32799768-32799480 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 62

Conread position: 4-296
Cow position: chr29:28840093-28840389 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 199, 251

Conread position: 4-298
Cow position: chr29:35292028-35292314 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 175

Conread position: 4-299
Cow position: chr29:11915760-11916046 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 27, 92

Conread position: 5-169
Cow position: chr29:22162312-22162147 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 5-172
Cow position: chr29:24578800-24578968 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 25

Conread position: 5-200
Cow position: chr29:8926524-8926328 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 20

Conread position: 5-296
Cow position: chr29:44378474-44378181 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 35

Conread position: 7-138
Cow position: chr29:10018519-10018650 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-163
Cow position: chr29:9455115-9454962 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 42

Conread position: 7-163
Cow position: chr29:11719907-11720063 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 39

Conread position: 7-170
Cow position: chr29:12626036-12625873 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-194
Cow position: chr29:15738399-15738213 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 7-195
Cow position: chr29:12309952-12310136 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 7-197
Cow position: chr29:5210429-5210621 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 105

Conread position: 7-197
Cow position: chr29:21941542-21941731 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 7-199
Cow position: chr29:40096906-40097094 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 66, 100

Conread position: 7-206
Cow position: chr29:28206877-28207075 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 18

Conread position: 7-209
Cow position: chr29:8176594-8176797 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 7-218
Cow position: chr29:20924847-20925057 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 7-230
Cow position: chr29:39131521-39131298 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 43

Conread position: 7-233
Cow position: chr29:21443398-21443170 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 211, 0

Conread position: 7-234
Cow position: chr29:12025527-12025309 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 213, 83

Conread position: 7-242
Cow position: chr29:5275311-5275076 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 208, 28

Conread position: 7-242
Cow position: chr29:22184201-22184436 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 163, 18

Conread position: 7-242
Cow position: chr29:29942787-29942551 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 212, 0

Conread position: 7-246
Cow position: chr29:24045936-24046177 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 213, 0

Conread position: 7-247
Cow position: chr29:23844778-23845020 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 6, 19

Conread position: 7-248
Cow position: chr29:25814895-25814654 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 213, 18

Conread position: 7-248
Cow position: chr29:32656374-32656617 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 143, 20

Conread position: 7-248
Cow position: chr29:36632919-36632679 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 66, 18

Conread position: 7-249
Cow position: chr29:15947110-15947351 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 213, 21

Conread position: 7-249
Cow position: chr29:43544659-43544423 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 213, 26

Conread position: 7-252
Cow position: chr29:34744679-34744446 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 7-270
Cow position: chr29:26270009-26270267 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 197, 13

Conread position: 7-278
Cow position: chr29:17297077-17297348 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 28

Conread position: 7-281
Cow position: chr29:36220469-36220758 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 7-283
Cow position: chr29:24035459-24035198 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 26

Conread position: 7-287
Cow position: chr29:30681769-30681485 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 176, 44

Conread position: 7-290
Cow position: chr29:20910750-20910466 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 213, 28

Conread position: 7-292
Cow position: chr29:14501534-14501816 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 213, 18

Conread position: 7-298
Cow position: chr29:36248977-36249266 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 211, 153

Conread position: 7-298
Cow position: chr29:42630064-42630347 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 213, 24

Conread position: 8-166
Cow position: chr29:9638373-9638221 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 8-235
Cow position: chr29:29795441-29795212 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 209, 0

Conread position: 8-249
Cow position: chr29:22068802-22068559 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 154

Conread position: 8-249
Cow position: chr29:22167138-22166905 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 157

Conread position: 8-274
Cow position: chr29:21196708-21196449 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 60, 17

Conread position: 8-276
Cow position: chr29:31489265-31489529 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 172, 17

Conread position: 8-290
Cow position: chr29:36522420-36522132 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 9-200
Cow position: chr29:6844684-6844499 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 23

Conread position: 9-217
Cow position: chr29:7966184-7966393 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 170

Conread position: 9-246
Cow position: chr29:27926720-27926953 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 206, 26

Conread position: 9-247
Cow position: chr29:37438192-37437953 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 211, 18

Conread position: 9-248
Cow position: chr29:1306916-1306682 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 9-249
Cow position: chr29:13028382-13028632 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 84

Conread position: 9-249
Cow position: chr29:31092395-31092631 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 198, 26

Conread position: 9-269
Cow position: chr29:3237410-3237147 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 211, 16

Conread position: 9-270
Cow position: chr29:16290669-16290922 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 155, 32

Conread position: 9-270
Cow position: chr29:32733243-32733501 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 211, 24

Conread position: 9-270
Cow position: chr29:34297626-34297372 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 211, 173

Conread position: 9-272
Cow position: chr29:27911537-27911793 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 198, 26

Conread position: 9-283
Cow position: chr29:23813093-23812836 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 209, 16

Conread position: 9-290
Cow position: chr29:23577846-23577560 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 142, 224

Conread position: 9-292
Cow position: chr29:11611784-11612066 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 26

Conread position: 9-301
Cow position: chr29:5046597-5046886 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 166, 13

Conread position: 10-199
Cow position: chr29:7103501-7103690 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 10-225
Cow position: chr29:28775514-28775305 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 210, 25

Conread position: 10-237
Cow position: chr29:13639425-13639194 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 27, 225

Conread position: 10-242
Cow position: chr29:24429898-24429662 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 21

Conread position: 10-270
Cow position: chr29:25284517-25284265 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 10-274
Cow position: chr29:2056004-2056263 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 210, 187

Conread position: 11-196
Cow position: chr29:847696-847513 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 14

Conread position: 11-248
Cow position: chr29:35677600-35677360 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 11-258
Cow position: chr29:26017557-26017310 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 60, 24

Conread position: 11-283
Cow position: chr29:35405845-35405579 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 128, 81

Conread position: 12-180
Cow position: chr29:11053911-11053746 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 162, 20

Conread position: 12-199
Cow position: chr29:2263045-2262863 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 12-239
Cow position: chr29:5892788-5893021 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 18-292
Cow position: chr29:14112330-14112599 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 143

Conread position: 20-170
Cow position: chr29:17154731-17154881 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 79

Conread position: 21-249
Cow position: chr29:3825927-3826148 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 22-184
Cow position: chr29:20468856-20469018 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 23-235
Cow position: chr29:12900596-12900382 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 105

Conread position: 24-169
Cow position: chr29:8686286-8686432 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 25-248
Cow position: chr29:23115042-23114819 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 195, 14

Conread position: 25-272
Cow position: chr29:5520527-5520283 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 195, 167

Conread position: 25-283
Cow position: chr29:5409184-5408930 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 133

Conread position: 25-290
Cow position: chr29:16652107-16652377 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 235

Conread position: 26-272
Cow position: chr29:22533918-22534164 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 49, 18

Conread position: 26-302
Cow position: chr29:1933612-1933338 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 194, 226

Conread position: 27-221
Cow position: chr29:25088706-25088897 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 175, 46

Conread position: 27-249
Cow position: chr29:4423479-4423268 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 193, 153

Conread position: 27-249
Cow position: chr29:9310559-9310785 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 27-249
Cow position: chr29:21645280-21645499 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 170, 8

Conread position: 28-202
Cow position: chr29:17409294-17409470 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 31-270
Cow position: chr29:465435-465195 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 183, 0

Conread position: 31-290
Cow position: chr29:16272706-16272968 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 189, 0

Conread position: 32-218
Cow position: chr29:20689765-20689581 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 32-248
Cow position: chr29:3549568-3549786 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 188, 0

Conread position: 32-265
Cow position: chr29:26130738-26130972 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 32

Conread position: 32-293
Cow position: chr29:22720686-22720425 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 158

Conread position: 33-249
Cow position: chr29:44684070-44684279 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 189, 11

Conread position: 33-283
Cow position: chr29:31981798-31982037 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 33-294
Cow position: chr29:32307585-32307338 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 67

Conread position: 34-180
Cow position: chr29:7310643-7310786 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 66

Conread position: 34-242
Cow position: chr29:363216-363426 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 184, 0

Conread position: 34-246
Cow position: chr29:353831-353617 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 186, 0

Conread position: 34-248
Cow position: chr29:25950191-25949972 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 10

Conread position: 34-249
Cow position: chr29:5769760-5769973 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 119

Conread position: 34-295
Cow position: chr29:25944335-25944071 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 10

Conread position: 35-180
Cow position: chr29:21509820-21509964 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 35-189
Cow position: chr29:36217083-36217236 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 146, 64

Conread position: 35-200
Cow position: chr29:16365920-16365752 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 11

Conread position: 35-235
Cow position: chr29:25874503-25874301 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 185, 0

Conread position: 35-246
Cow position: chr29:19389446-19389659 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 185, 0

Conread position: 35-246
Cow position: chr29:27524867-27524654 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 185, 0

Conread position: 35-246
Cow position: chr29:36329477-36329693 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 158, 125

Conread position: 35-248
Cow position: chr29:19253861-19253648 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 95, 80

Conread position: 35-248
Cow position: chr29:20673842-20673627 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 185, 0

Conread position: 35-249
Cow position: chr29:23637711-23637492 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 35-249
Cow position: chr29:26540572-26540358 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 135, 146

Conread position: 35-249
Cow position: chr29:29324452-29324238 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 144, 65

Conread position: 35-249
Cow position: chr29:33321318-33321531 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 56

Conread position: 35-270
Cow position: chr29:8292949-8292711 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 45

Conread position: 35-272
Cow position: chr29:4070596-4070827 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 188, 59

Conread position: 35-277
Cow position: chr29:38858245-38858007 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 154, 132

Conread position: 35-283
Cow position: chr29:24188097-24187850 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 218

Conread position: 35-287
Cow position: chr29:396381-396617 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 188, 57

Conread position: 35-287
Cow position: chr29:20626535-20626783 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 182, 214

Conread position: 35-287
Cow position: chr29:39038301-39038051 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 71

Conread position: 35-290
Cow position: chr29:29588958-29588706 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 185, 133

Conread position: 35-296
Cow position: chr29:20527195-20526936 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 183, 79

Conread position: 35-299
Cow position: chr29:15944528-15944795 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 185, 72

Conread position: 36-186
Cow position: chr29:43252702-43252552 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 36-246
Cow position: chr29:28396660-28396876 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 36-249
Cow position: chr29:36357098-36357310 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 184, 63

Conread position: 36-252
Cow position: chr29:23825242-23825027 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 5, 149

Conread position: 36-254
Cow position: chr29:501165-501387 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 33

Conread position: 36-272
Cow position: chr29:12680125-12680362 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 74, 70

Conread position: 36-283
Cow position: chr29:17109929-17110165 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 184, 64

Conread position: 37-178
Cow position: chr29:5788999-5789139 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 37-180
Cow position: chr29:11042402-11042541 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 37-246
Cow position: chr29:40610664-40610453 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 0

Conread position: 37-247
Cow position: chr29:18200754-18200965 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 183, 77

Conread position: 37-283
Cow position: chr29:7956020-7955779 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 137, 98

Conread position: 37-285
Cow position: chr29:35258955-35259195 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 183, 137

Conread position: 37-286
Cow position: chr29:35501684-35501449 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 234, 131

Conread position: 38-240
Cow position: chr29:3100296-3100092 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 72, 68

Conread position: 38-249
Cow position: chr29:30294902-30294689 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 69

Conread position: 38-273
Cow position: chr29:28420726-28420959 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 66

Conread position: 38-299
Cow position: chr29:36586538-36586800 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 182, 213

Conread position: 40-195
Cow position: chr29:26654073-26653915 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 40-200
Cow position: chr29:40299047-40298887 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 40-249
Cow position: chr29:18556645-18556849 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 180, 147

Conread position: 40-249
Cow position: chr29:31934352-31934558 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 178, 144

Conread position: 40-283
Cow position: chr29:35084249-35084008 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 180, 134

Conread position: 41-263
Cow position: chr29:34359847-34359632 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 37

Conread position: 41-277
Cow position: chr29:28814006-28813766 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 126

Conread position: 41-287
Cow position: chr29:44938016-44937779 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 88

Conread position: 42-227
Cow position: chr29:28166245-28166061 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 54

Conread position: 42-246
Cow position: chr29:23876859-23876653 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 178, 0

Conread position: 42-248
Cow position: chr29:22723576-22723777 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 178, 140

Conread position: 43-247
Cow position: chr29:38581949-38582150 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 177, 32

Conread position: 44-235
Cow position: chr29:29974037-29973845 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 30

Conread position: 44-268
Cow position: chr29:8163850-8163630 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 67, 21

Conread position: 44-283
Cow position: chr29:32656115-32655881 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 144

Conread position: 47-250
Cow position: chr29:3292928-3293126 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 120, 0

Conread position: 47-290
Cow position: chr29:4813317-4813561 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 115

Conread position: 48-190
Cow position: chr29:31491207-31491354 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 68, 0

Conread position: 48-270
Cow position: chr29:38754958-38754739 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 66, 134

Conread position: 49-291
Cow position: chr29:9378619-9378856 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 169, 133

Conread position: 51-249
Cow position: chr29:16200494-16200294 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 171, 0

Conread position: 51-298
Cow position: chr29:33511745-33511495 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 169, 0

Conread position: 52-192
Cow position: chr29:34517498-34517368 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 52-235
Cow position: chr29:24051396-24051210 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 141, 75

Conread position: 53-206
Cow position: chr29:1220145-1219992 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 54-277
Cow position: chr29:4053353-4053138 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 165, 133

Conread position: 54-303
Cow position: chr29:21933134-21932888 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 211, 190

Conread position: 55-248
Cow position: chr29:14552686-14552881 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 163, 0

Conread position: 55-274
Cow position: chr29:5953871-5953653 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 147, 193

Conread position: 56-285
Cow position: chr29:19363700-19363927 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 164, 50

Conread position: 57-248
Cow position: chr29:20772432-20772238 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 160, 64

Conread position: 57-287
Cow position: chr29:28478317-28478549 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 163, 126

Conread position: 60-249
Cow position: chr29:23913400-23913215 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 157, 122

Conread position: 62-246
Cow position: chr29:8629104-8628918 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 158, 0

Conread position: 62-274
Cow position: chr29:17436744-17436952 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 67

Conread position: 63-240
Cow position: chr29:25793142-25793317 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 157, 64

Conread position: 63-248
Cow position: chr29:42886967-42887152 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 157, 15

Conread position: 66-290
Cow position: chr29:28087668-28087899 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 42

Conread position: 67-270
Cow position: chr29:22577178-22576979 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 153, 15

Conread position: 67-277
Cow position: chr29:43088311-43088516 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 153, 33

Conread position: 68-246
Cow position: chr29:29578972-29578792 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 152, 0

Conread position: 68-270
Cow position: chr29:19420612-19420421 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 150, 129

Conread position: 68-274
Cow position: chr29:19187027-19187229 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 152, 116

Conread position: 68-277
Cow position: chr29:629539-629742 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 114, 157

Conread position: 68-283
Cow position: chr29:3711380-3711588 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 151, 63

Conread position: 68-287
Cow position: chr29:4441204-4440990 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 77

Conread position: 68-295
Cow position: chr29:18878480-18878254 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 152, 171

Conread position: 69-249
Cow position: chr29:24365894-24365715 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 151, 38

Conread position: 70-273
Cow position: chr29:14576862-14577063 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 150, 104

Conread position: 73-279
Cow position: chr29:26539241-26539439 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 147, 98

Conread position: 74-290
Cow position: chr29:23142327-23142116 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 19, 8

Conread position: 74-299
Cow position: chr29:4648202-4647986 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 75-236
Cow position: chr29:42865567-42865729 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 80

Conread position: 76-283
Cow position: chr29:37606695-37606486 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 144, 116

Conread position: 77-249
Cow position: chr29:25432464-25432636 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 134, 15

Conread position: 79-277
Cow position: chr29:4484112-4484303 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 21

Conread position: 80-264
Cow position: chr29:23819377-23819191 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 170

Conread position: 80-270
Cow position: chr29:14746793-14746977 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 42

Conread position: 80-282
Cow position: chr29:34675996-34675796 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 173

Conread position: 82-300
Cow position: chr29:34355984-34356200 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 139, 13

Conread position: 84-281
Cow position: chr29:34274359-34274164 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 16

Conread position: 85-290
Cow position: chr29:22127888-22128090 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 166, 88

Conread position: 90-284
Cow position: chr29:22652346-22652535 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 92

Conread position: 94-232
Cow position: chr29:28279260-28279120 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 94-245
Cow position: chr29:28257168-28257320 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 88

Conread position: 94-270
Cow position: chr29:10203799-10203971 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 86

Conread position: 94-274
Cow position: chr29:11081369-11081189 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 159

Conread position: 94-281
Cow position: chr29:42404974-42405156 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 159

Conread position: 94-290
Cow position: chr29:16735251-16735452 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 96-272
Cow position: chr29:24604925-24605097 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 127, 92

Conread position: 97-292
Cow position: chr29:38732183-38732377 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 123, 149

Conread position: 100-244
Cow position: chr29:2414719-2414573 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 100-249
Cow position: chr29:41422878-41422727 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 119, 0

Conread position: 101-256
Cow position: chr29:29447415-29447574 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 15, 99

Conread position: 101-287
Cow position: chr29:14828194-14828005 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 60

Conread position: 107-272
Cow position: chr29:22019147-22018985 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 67

Conread position: 112-270
Cow position: chr29:24119455-24119299 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 108, 134

Conread position: 115-269
Cow position: chr29:8841397-8841251 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 72

Conread position: 123-249
Cow position: chr29:4741335-4741207 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 128-254
Cow position: chr29:16164375-16164248 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 125

Conread position: 138-299
Cow position: chr29:23209395-23209557 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 119

Show alignments to all cow chromosomes.