Cow genome map

Conread name: Tra1-TCH01E080082

Conread position: 216-852
Cow position:
Alignm length: 672
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 13

Conread position: 218-852
Cow position:
Alignm length: 656
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 8

Conread position: 226-843
Cow position:
Alignm length: 648
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 226-855
Cow position:
Alignm length: 651
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 644
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 23

Conread position: 226-855
Cow position:
Alignm length: 650
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 0

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 26

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 654
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 23

Conread position: 226-855
Cow position:
Alignm length: 641
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 23

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 23

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-856
Cow position:
Alignm length: 649
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 23

Conread position: 229-843
Cow position:
Alignm length: 634
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 147

Conread position: 229-852
Cow position:
Alignm length: 647
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 229-852
Cow position:
Alignm length: 659
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 18

Conread position: 230-852
Cow position:
Alignm length: 638
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 19

Conread position: 232-852
Cow position:
Alignm length: 641
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 233-852
Cow position:
Alignm length: 647
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 234-851
Cow position:
Alignm length: 636
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 15

Conread position: 234-852
Cow position:
Alignm length: 653
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 15

Conread position: 234-852
Cow position:
Alignm length: 624
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 276

Conread position: 234-852
Cow position:
Alignm length: 639
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 15

Conread position: 234-855
Cow position:
Alignm length: 640
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 77

Conread position: 234-855
Cow position:
Alignm length: 641
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 282

Conread position: 234-855
Cow position:
Alignm length: 640
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 15

Conread position: 234-855
Cow position:
Alignm length: 640
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 29

Conread position: 235-855
Cow position:
Alignm length: 639
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 64

Conread position: 237-852
Cow position:
Alignm length: 637
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 310

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 642
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 233

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 195

Conread position: 237-855
Cow position:
Alignm length: 636
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 138

Conread position: 237-855
Cow position:
Alignm length: 639
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 105

Conread position: 237-855
Cow position:
Alignm length: 633
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 90

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 637
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 0

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 637
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 155

Conread position: 238-852
Cow position:
Alignm length: 633
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 11

Conread position: 239-844
Cow position:
Alignm length: 635
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 138

Conread position: 241-835
Cow position:
Alignm length: 615
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 100

Conread position: 242-855
Cow position:
Alignm length: 631
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 0

Conread position: 247-833
Cow position:
Alignm length: 600
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 127

Conread position: 247-848
Cow position:
Alignm length: 622
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 247-855
Cow position:
Alignm length: 630
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 248-852
Cow position:
Alignm length: 629
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 220

Conread position: 254-851
Cow position:
Alignm length: 617
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 196

Conread position: 266-852
Cow position:
Alignm length: 618
Alignm identity: 403
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 106, 12

Conread position: 269-852
Cow position:
Alignm length: 598
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 210

Conread position: 273-856
Cow position:
Alignm length: 601
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 370

Conread position: 276-814
Cow position:
Alignm length: 557
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 277-764
Cow position:
Alignm length: 505
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 284-852
Cow position:
Alignm length: 579
Alignm identity: 358
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 34

Conread position: 310-855
Cow position:
Alignm length: 564
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 249

Conread position: 314-855
Cow position:
Alignm length: 559
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 453

Conread position: 322-852
Cow position:
Alignm length: 554
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 72

Conread position: 324-855
Cow position:
Alignm length: 550
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 0

Conread position: 331-855
Cow position:
Alignm length: 543
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 332-852
Cow position:
Alignm length: 534
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 305

Conread position: 345-855
Cow position:
Alignm length: 529
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 362-855
Cow position:
Alignm length: 512
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 266

Conread position: 383-855
Cow position:
Alignm length: 491
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 108

Conread position: 394-855
Cow position:
Alignm length: 481
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 397-855
Cow position:
Alignm length: 473
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 307

Conread position: 401-842
Cow position:
Alignm length: 460
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 100

Conread position: 405-817
Cow position:
Alignm length: 433
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 45

Conread position: 409-855
Cow position:
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 418-852
Cow position:
Alignm length: 451
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 235

Conread position: 419-851
Cow position:
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 73

Conread position: 433-855
Cow position:
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 13

Conread position: 434-855
Cow position:
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 446-855
Cow position:
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 189

Conread position: 453-851
Cow position:
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 200

Conread position: 455-852
Cow position:
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 170

Conread position: 461-855
Cow position:
Alignm length: 414
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 480-855
Cow position:
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 359

Conread position: 485-855
Cow position:
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 488-852
Cow position:
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 158

Conread position: 500-852
Cow position:
Alignm length: 370
Alignm identity: 258
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 45

Conread position: 511-852
Cow position:
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 131

Conread position: 530-840
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 219

Conread position: 530-855
Cow position:
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 6

Conread position: 534-855
Cow position:
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 536-855
Cow position:
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 293

Conread position: 545-852
Cow position:
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 82

Conread position: 545-852
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 266

Conread position: 555-855
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 38

Conread position: 578-839
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 237

Conread position: 578-843
Cow position:
Alignm length: 275
Alignm identity: 198
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 80, 15

Conread position: 578-852
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 232

Conread position: 581-852
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 20, 54

Conread position: 582-835
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 172

Conread position: 582-848
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 104, 35

Conread position: 582-855
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 588-852
Cow position:
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 589-848
Cow position:
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 107, 160

Conread position: 594-855
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 95, 0

Conread position: 599-855
Cow position:
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 92, 0

Conread position: 606-848
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 85, 0

Conread position: 609-851
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 615-842
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 59, 109

Conread position: 618-855
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 628-845
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 161

Conread position: 628-851
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 131, 27

Conread position: 630-855
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 70, 0

Conread position: 646-852
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 58, 77

Conread position: 652-852
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 150

Conread position: 664-856
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 73

Conread position: 666-855
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 172

Conread position: 668-842
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 136

Conread position: 670-852
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 673-855
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 675-852
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 115

Conread position: 675-852
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 18

Conread position: 678-841
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 134

Conread position: 683-852
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 118

Conread position: 684-842
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 693-855
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 695-852
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 99

Conread position: 695-852
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 106

Conread position: 695-855
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position:
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 695-855
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position:
Alignm length: 162
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 704-852
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 56, 101

Conread position: 704-855
Cow position:
Alignm length: 153
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 716-855
Cow position:
Alignm length: 141
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.