Cow genome map

Conread name: Tra1-TCH01E080082

Conread position: 218-852
Cow position:
Alignm length: 653
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 31

Conread position: 226-827
Cow position:
Alignm length: 622
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 21

Conread position: 226-843
Cow position:
Alignm length: 630
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 20

Conread position: 226-852
Cow position:
Alignm length: 645
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 8

Conread position: 226-852
Cow position:
Alignm length: 646
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 226-852
Cow position:
Alignm length: 639
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 23

Conread position: 226-855
Cow position:
Alignm length: 657
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 651
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 21

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 26

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 651
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 23

Conread position: 229-852
Cow position:
Alignm length: 653
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 232-851
Cow position:
Alignm length: 639
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 20

Conread position: 232-851
Cow position:
Alignm length: 638
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 17

Conread position: 232-855
Cow position:
Alignm length: 638
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 16

Conread position: 234-852
Cow position:
Alignm length: 639
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 12

Conread position: 234-852
Cow position:
Alignm length: 633
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 15

Conread position: 234-852
Cow position:
Alignm length: 637
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 132

Conread position: 234-855
Cow position:
Alignm length: 641
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 13

Conread position: 234-855
Cow position:
Alignm length: 640
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 15

Conread position: 237-852
Cow position:
Alignm length: 635
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 639
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 78

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 247-855
Cow position:
Alignm length: 634
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 209

Conread position: 251-855
Cow position:
Alignm length: 616
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 253-850
Cow position:
Alignm length: 611
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 32

Conread position: 253-852
Cow position:
Alignm length: 614
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 31

Conread position: 254-852
Cow position:
Alignm length: 625
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 43

Conread position: 274-852
Cow position:
Alignm length: 590
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 126

Conread position: 289-855
Cow position:
Alignm length: 585
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 0

Conread position: 322-855
Cow position:
Alignm length: 541
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 275

Conread position: 323-850
Cow position:
Alignm length: 533
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 335-852
Cow position:
Alignm length: 537
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 141

Conread position: 350-795
Cow position:
Alignm length: 466
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 50

Conread position: 354-855
Cow position:
Alignm length: 516
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 35

Conread position: 366-848
Cow position:
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 30

Conread position: 372-848
Cow position:
Alignm length: 506
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 52

Conread position: 380-855
Cow position:
Alignm length: 494
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 395-852
Cow position:
Alignm length: 478
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 274

Conread position: 396-855
Cow position:
Alignm length: 478
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 398-852
Cow position:
Alignm length: 468
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 238

Conread position: 403-855
Cow position:
Alignm length: 472
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 228

Conread position: 403-855
Cow position:
Alignm length: 471
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 43

Conread position: 409-851
Cow position:
Alignm length: 453
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 392

Conread position: 409-855
Cow position:
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 399

Conread position: 421-855
Cow position:
Alignm length: 447
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 228

Conread position: 423-855
Cow position:
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 290

Conread position: 428-843
Cow position:
Alignm length: 427
Alignm identity: 290
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 71, 5

Conread position: 443-852
Cow position:
Alignm length: 415
Alignm identity: 272
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 9

Conread position: 448-828
Cow position:
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 21

Conread position: 470-851
Cow position:
Alignm length: 405
Alignm identity: 274
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 99, 299

Conread position: 476-852
Cow position:
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 155

Conread position: 476-855
Cow position:
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 499-852
Cow position:
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 501-852
Cow position:
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 17

Conread position: 505-852
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 82, 135

Conread position: 511-856
Cow position:
Alignm length: 360
Alignm identity: 247
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 73, 32

Conread position: 515-855
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 518-852
Cow position:
Alignm length: 352
Alignm identity: 237
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 169

Conread position: 521-852
Cow position:
Alignm length: 337
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 232, 43

Conread position: 532-855
Cow position:
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 537-855
Cow position:
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 280

Conread position: 539-844
Cow position:
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 88

Conread position: 540-855
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 207

Conread position: 545-855
Cow position:
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 82

Conread position: 562-857
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 9

Conread position: 581-852
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 224, 14

Conread position: 582-849
Cow position:
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 22

Conread position: 582-852
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 172

Conread position: 582-852
Cow position:
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 582-852
Cow position:
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 582-855
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 582-855
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 587-852
Cow position:
Alignm length: 271
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 589-848
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 109, 159

Conread position: 589-851
Cow position:
Alignm length: 268
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 109, 237

Conread position: 594-851
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 140

Conread position: 594-852
Cow position:
Alignm length: 261
Alignm identity: 186
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 159, 99

Conread position: 598-852
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 101, 7

Conread position: 609-855
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 82, 0

Conread position: 610-852
Cow position:
Alignm length: 248
Alignm identity: 162
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 163

Conread position: 629-852
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 99

Conread position: 629-855
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 633-855
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 126

Conread position: 637-852
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 60, 81

Conread position: 646-855
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 660-855
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 660-855
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 144

Conread position: 665-855
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 670-852
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 42

Conread position: 682-851
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 80, 119

Conread position: 684-852
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 684-852
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 149, 9

Conread position: 693-851
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 111, 100

Conread position: 696-852
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 702-852
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 53

Conread position: 704-851
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 98

Conread position: 704-855
Cow position:
Alignm length: 153
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 706-852
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 49

Conread position: 717-852
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 738-852
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 60

Show alignments to all cow chromosomes.