Cow genome map

Conread name: Tra1-TCH01E080082

Conread position: 152-855
Cow position:
Alignm length: 722
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 0

Conread position: 182-855
Cow position:
Alignm length: 707
Alignm identity: 435
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 62, 53

Conread position: 212-852
Cow position:
Alignm length: 668
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 37

Conread position: 217-855
Cow position:
Alignm length: 654
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 32

Conread position: 217-856
Cow position:
Alignm length: 651
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 30

Conread position: 218-855
Cow position:
Alignm length: 656
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 31

Conread position: 226-850
Cow position:
Alignm length: 648
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 23

Conread position: 226-852
Cow position:
Alignm length: 647
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 23

Conread position: 226-852
Cow position:
Alignm length: 645
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 26

Conread position: 226-852
Cow position:
Alignm length: 664
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 226-855
Cow position:
Alignm length: 651
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 21

Conread position: 226-855
Cow position:
Alignm length: 647
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 651
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 20

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 21

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 23

Conread position: 226-855
Cow position:
Alignm length: 653
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 23

Conread position: 229-855
Cow position:
Alignm length: 647
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 234-842
Cow position:
Alignm length: 628
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 15

Conread position: 234-852
Cow position:
Alignm length: 638
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 15

Conread position: 237-855
Cow position:
Alignm length: 637
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 199

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 69

Conread position: 237-855
Cow position:
Alignm length: 647
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 639
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 237-855
Cow position:
Alignm length: 635
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 639
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 646
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 311

Conread position: 238-855
Cow position:
Alignm length: 637
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 239-852
Cow position:
Alignm length: 643
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 531

Conread position: 239-852
Cow position:
Alignm length: 638
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 212

Conread position: 247-851
Cow position:
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 145

Conread position: 250-844
Cow position:
Alignm length: 613
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 0

Conread position: 251-852
Cow position:
Alignm length: 619
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 34

Conread position: 252-852
Cow position:
Alignm length: 623
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 253-843
Cow position:
Alignm length: 609
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 0

Conread position: 253-852
Cow position:
Alignm length: 608
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 25

Conread position: 253-852
Cow position:
Alignm length: 613
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 134

Conread position: 253-852
Cow position:
Alignm length: 608
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 165

Conread position: 253-855
Cow position:
Alignm length: 622
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 88

Conread position: 258-833
Cow position:
Alignm length: 590
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 27

Conread position: 259-852
Cow position:
Alignm length: 616
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 40

Conread position: 261-833
Cow position:
Alignm length: 593
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 72

Conread position: 261-852
Cow position:
Alignm length: 611
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 283-852
Cow position:
Alignm length: 605
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 69

Conread position: 285-852
Cow position:
Alignm length: 588
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 374

Conread position: 285-855
Cow position:
Alignm length: 592
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 0

Conread position: 298-834
Cow position:
Alignm length: 542
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 294

Conread position: 307-855
Cow position:
Alignm length: 563
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 0

Conread position: 310-840
Cow position:
Alignm length: 553
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 69

Conread position: 319-852
Cow position:
Alignm length: 561
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 145

Conread position: 324-855
Cow position:
Alignm length: 550
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 0

Conread position: 334-855
Cow position:
Alignm length: 540
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 0

Conread position: 357-855
Cow position:
Alignm length: 516
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 13

Conread position: 358-852
Cow position:
Alignm length: 513
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 189

Conread position: 359-852
Cow position:
Alignm length: 512
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 0

Conread position: 361-836
Cow position:
Alignm length: 490
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 279

Conread position: 362-848
Cow position:
Alignm length: 505
Alignm identity: 326
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 122, 107

Conread position: 363-852
Cow position:
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 454

Conread position: 364-852
Cow position:
Alignm length: 512
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 53

Conread position: 365-797
Cow position:
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 300

Conread position: 366-845
Cow position:
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 165

Conread position: 377-855
Cow position:
Alignm length: 498
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 73

Conread position: 392-852
Cow position:
Alignm length: 479
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 61

Conread position: 392-855
Cow position:
Alignm length: 483
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 407-855
Cow position:
Alignm length: 471
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 413

Conread position: 419-856
Cow position:
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 17

Conread position: 420-851
Cow position:
Alignm length: 453
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 28

Conread position: 421-852
Cow position:
Alignm length: 446
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 130

Conread position: 422-852
Cow position:
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 79

Conread position: 443-852
Cow position:
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 227

Conread position: 444-843
Cow position:
Alignm length: 423
Alignm identity: 278
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 25

Conread position: 453-852
Cow position:
Alignm length: 418
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 453-855
Cow position:
Alignm length: 421
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 455-851
Cow position:
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 7

Conread position: 470-841
Cow position:
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 479-852
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 18

Conread position: 480-851
Cow position:
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 333

Conread position: 485-852
Cow position:
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 144

Conread position: 515-855
Cow position:
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 522-844
Cow position:
Alignm length: 343
Alignm identity: 243
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 67, 24

Conread position: 528-851
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 109

Conread position: 534-844
Cow position:
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 542-841
Cow position:
Alignm length: 307
Alignm identity: 200
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 37

Conread position: 544-852
Cow position:
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 101

Conread position: 554-852
Cow position:
Alignm length: 319
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 35, 77

Conread position: 560-851
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 102

Conread position: 575-831
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 115, 26

Conread position: 582-842
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 116, 33

Conread position: 582-855
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 115, 0

Conread position: 582-855
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 582-855
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 583-837
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 92, 246

Conread position: 589-849
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 174, 56

Conread position: 589-852
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 102

Conread position: 597-855
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 94, 0

Conread position: 608-855
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 83, 8

Conread position: 610-838
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 615-855
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 73, 0

Conread position: 621-852
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 71, 131

Conread position: 622-856
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 141, 42

Conread position: 630-852
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 0

Conread position: 633-852
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 171

Conread position: 639-855
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 0

Conread position: 644-855
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 645-855
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 649-855
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 653-855
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 668-855
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 671-852
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 68

Conread position: 682-856
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 77, 11

Conread position: 684-852
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 118

Conread position: 687-852
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 39, 5

Conread position: 695-852
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 55

Conread position: 695-852
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 695-852
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 36

Conread position: 695-855
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 65

Conread position: 704-855
Cow position:
Alignm length: 153
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 704-855
Cow position:
Alignm length: 153
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 705-851
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 35

Conread position: 706-855
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 24

Show alignments to all cow chromosomes.